Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRTM2O43300 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LRRTM2O43300 HSPD1P14-201ENST00000432666 1618 ntBASIC4.21□□□□□ -1.73
LRRTM2O43300 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 OR4K17-201ENST00000315543 1032 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 AL359837.1-201ENST00000381357 287 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LRRTM2O43300 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AC140479.3-201ENST00000418944 1126 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC00993-201ENST00000420453 540 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AL645608.4-201ENST00000423619 154 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AC012497.1-201ENST00000429392 575 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 BMS1P19-201ENST00000433925 393 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 CBX1P4-201ENST00000439415 457 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 NUTF2P3-201ENST00000448540 384 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 HMGB1P26-201ENST00000452520 628 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AL645939.1-201ENST00000453429 797 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 RN7SL303P-201ENST00000469773 251 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.21□□□□□ -1.74
LRRTM2O43300 PPM1AP1-201ENST00000502740 1135 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AC093227.2-201ENST00000589357 285 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 KATNBL1P5-201ENST00000605015 517 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AC114781.5-201ENST00000615297 108 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AC253576.2-201ENST00000618815 580 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 PNPT1P2-201ENST00000456768 2050 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AL136964.1-201ENST00000622038 2990 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LRRTM2O43300 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 ZNF137P-201ENST00000456718 1920 ntBASIC4.21□□□□□ -1.74
LRRTM2O43300 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRTM2O43300 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 RNF6P1-201ENST00000444889 1784 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC108467.2-201ENST00000617640 1597 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 OR56B2P-201ENST00000317102 954 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 SNORD115-48-201ENST00000364764 76 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.2□□□□□ -1.74
LRRTM2O43300 OR2X1P-201ENST00000421144 687 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 RPS24P8-201ENST00000431490 402 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AL451139.1-201ENST00000434718 346 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 TPMTP4-201ENST00000450749 678 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC092691.2-201ENST00000461787 803 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC108729.2-201ENST00000476543 840 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC012158.1-204ENST00000483430 465 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC093663.2-201ENST00000484625 313 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.2□□□□□ -1.74
LRRTM2O43300 RN7SL604P-201ENST00000492589 296 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC103833.1-201ENST00000517442 172 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 NOP56P3-201ENST00000549457 385 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.2□□□□□ -1.74
LRRTM2O43300 AC135178.6-201ENST00000605314 398 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 AC090948.1-201ENST00000607464 549 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 OR7A19P-201ENST00000608051 733 ntBASIC4.2□□□□□ -1.74
LRRTM2O43300 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRRTM2O43300 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms