Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RPL31P61-201ENST00000496160 376 ntBASIC4.46□□□□□ -1.7
MSH4O15457 AC087369.1-201ENST00000520775 996 ntBASIC4.46□□□□□ -1.7
MSH4O15457 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.46□□□□□ -1.7
MSH4O15457 AC022882.1-201ENST00000532142 501 ntBASIC4.46□□□□□ -1.7
MSH4O15457 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.46□□□□□ -1.7
MSH4O15457 UBTFL9-201ENST00000534504 1148 ntBASIC4.46□□□□□ -1.7
MSH4O15457 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.46□□□□□ -1.7
MSH4O15457 GLRXP2-201ENST00000555594 321 ntBASIC4.46□□□□□ -1.7
MSH4O15457 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
MSH4O15457 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.46□□□□□ -1.7
MSH4O15457 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.46□□□□□ -1.7
MSH4O15457 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.46□□□□□ -1.7
MSH4O15457 AC124856.1-201ENST00000600819 896 ntBASIC4.46□□□□□ -1.7
MSH4O15457 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MSH4O15457 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
MSH4O15457 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MSH4O15457 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
MSH4O15457 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MSH4O15457 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
MSH4O15457 ZNF962P-201ENST00000443465 3140 ntBASIC4.46□□□□□ -1.7
MSH4O15457 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MSH4O15457 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
MSH4O15457 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.45□□□□□ -1.7
MSH4O15457 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
MSH4O15457 RNU6-152P-201ENST00000384037 107 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AL450992.3-201ENST00000413192 568 ntBASIC4.45□□□□□ -1.7
MSH4O15457 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.45□□□□□ -1.7
MSH4O15457 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.45□□□□□ -1.7
MSH4O15457 RPS29P7-201ENST00000439662 171 ntBASIC4.45□□□□□ -1.7
MSH4O15457 VN1R25P-201ENST00000443385 738 ntBASIC4.45□□□□□ -1.7
MSH4O15457 RPS6P2-201ENST00000454208 705 ntBASIC4.45□□□□□ -1.7
MSH4O15457 VN1R40P-201ENST00000455196 941 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.45□□□□□ -1.7
MSH4O15457 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.45□□□□□ -1.7
MSH4O15457 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.45□□□□□ -1.7
MSH4O15457 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.45□□□□□ -1.7
MSH4O15457 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.45□□□□□ -1.7
MSH4O15457 AC068020.1-201ENST00000594215 661 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AL020997.2-201ENST00000602607 184 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.45□□□□□ -1.7
MSH4O15457 AL645927.2-201ENST00000618350 349 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AP001005.3-201ENST00000622049 129 ntBASIC4.45□□□□□ -1.7
MSH4O15457 AC073530.2-201ENST00000623987 261 ntBASIC4.45□□□□□ -1.7
MSH4O15457 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
MSH4O15457 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH4O15457 AP002001.2-201ENST00000529025 1469 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
MSH4O15457 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
MSH4O15457 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MSH4O15457 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MSH4O15457 AC233289.1-201ENST00000403700 508 ntBASIC4.44□□□□□ -1.7
MSH4O15457 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
MSH4O15457 Z97055.1-201ENST00000419730 712 ntBASIC4.44□□□□□ -1.7
MSH4O15457 RPL17P36-201ENST00000420302 549 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AL356806.1-201ENST00000422524 916 ntBASIC4.44□□□□□ -1.7
MSH4O15457 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MSH4O15457 ELOCP8-201ENST00000439309 332 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AL450263.2-201ENST00000439400 589 ntBASIC4.44□□□□□ -1.7
MSH4O15457 HMGB1P37-201ENST00000439613 609 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 AC069285.2-201ENST00000440210 275 ntBASIC4.44□□□□□ -1.7
MSH4O15457 ELOCP15-201ENST00000442090 332 ntBASIC4.44□□□□□ -1.7
MSH4O15457 VN1R48P-201ENST00000448149 1036 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 CALM1P2-201ENST00000452941 448 ntBASIC4.44□□□□□ -1.7
MSH4O15457 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 HMGB3P14-201ENST00000494195 599 ntBASIC4.44□□□□□ -1.7
MSH4O15457 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 PCNAP1-201ENST00000505363 709 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.44□□□□□ -1.7
MSH4O15457 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MSH4O15457 RNU6-352P-201ENST00000516908 107 ntBASIC4.44□□□□□ -1.7
MSH4O15457 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MSH4O15457 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.44□□□□□ -1.7
MSH4O15457 OR8X1P-201ENST00000534542 869 ntBASIC4.44□□□□□ -1.7
MSH4O15457 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.44□□□□□ -1.7
MSH4O15457 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
MSH4O15457 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH4O15457 AC015726.1-201ENST00000602353 681 ntBASIC4.44□□□□□ -1.7
MSH4O15457 MTCO2P22-201ENST00000603246 681 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AC084373.1-201ENST00000603311 235 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AP000255.1-201ENST00000610276 676 ntBASIC4.44□□□□□ -1.7
MSH4O15457 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.44□□□□□ -1.7
MSH4O15457 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 460.8 ms