Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 RAD1P2-201ENST00000446414 663 ntBASIC4.11□□□□□ -1.75
LSM1O15116 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
LSM1O15116 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
LSM1O15116 MTND3P6-201ENST00000485242 339 ntBASIC4.11□□□□□ -1.75
LSM1O15116 RPS27AP16-201ENST00000492222 470 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.11□□□□□ -1.75
LSM1O15116 BNIP3P41-201ENST00000503774 571 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.11□□□□□ -1.75
LSM1O15116 MIR4480-201ENST00000582492 71 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.11□□□□□ -1.75
LSM1O15116 AC064801.1-201ENST00000612025 407 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AC023043.4-201ENST00000612081 449 ntBASIC4.11□□□□□ -1.75
LSM1O15116 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.11□□□□□ -1.75
LSM1O15116 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LSM1O15116 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LSM1O15116 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LSM1O15116 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LSM1O15116 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM1O15116 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LSM1O15116 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LSM1O15116 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM1O15116 MIR331-201ENST00000362302 94 ntBASIC4.1□□□□□ -1.75
LSM1O15116 RNU6-152P-201ENST00000384037 107 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AL583835.1-201ENST00000399570 407 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AMZ2P2-201ENST00000406819 1057 ntBASIC4.1□□□□□ -1.75
LSM1O15116 SNORA11F-201ENST00000408237 128 ntBASIC4.1□□□□□ -1.75
LSM1O15116 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM1O15116 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.1□□□□□ -1.75
LSM1O15116 AC006455.6-201ENST00000426192 893 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM1O15116 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LSM1O15116 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.1□□□□□ -1.75
LSM1O15116 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
LSM1O15116 AC073264.2-201ENST00000448886 166 ntBASIC4.1□□□□□ -1.75
LSM1O15116 HMGB3P22-202ENST00000451823 572 ntBASIC4.1□□□□□ -1.75
LSM1O15116 RN7SL610P-201ENST00000463845 291 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC006517.1-201ENST00000480485 328 ntBASIC4.1□□□□□ -1.75
LSM1O15116 RPL32P9-201ENST00000487963 407 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC025554.1-201ENST00000505641 188 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.1□□□□□ -1.75
LSM1O15116 AC017037.1-201ENST00000508460 471 ntBASIC4.1□□□□□ -1.75
LSM1O15116 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM1O15116 SNORA70.17-201ENST00000516449 133 ntBASIC4.1□□□□□ -1.75
LSM1O15116 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.1□□□□□ -1.75
LSM1O15116 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LSM1O15116 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC083899.3-201ENST00000603413 594 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AL049844.2-201ENST00000604280 628 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC025175.1-201ENST00000606482 759 ntBASIC4.1□□□□□ -1.75
LSM1O15116 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM1O15116 AC055764.2-201ENST00000610089 670 ntBASIC4.1□□□□□ -1.75
LSM1O15116 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM1O15116 uc_338.13-201ENST00000618243 179 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AP000843.1-201ENST00000624880 701 ntBASIC4.1□□□□□ -1.75
LSM1O15116 AC008013.2-202ENST00000637965 364 ntBASIC4.1□□□□□ -1.75
LSM1O15116 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LSM1O15116 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM1O15116 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM1O15116 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LSM1O15116 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.09□□□□□ -1.75
LSM1O15116 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
LSM1O15116 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.09□□□□□ -1.75
LSM1O15116 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
LSM1O15116 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM1O15116 MIR421-201ENST00000365696 85 ntBASIC4.09□□□□□ -1.75
LSM1O15116 RPL23AP59-201ENST00000399415 461 ntBASIC4.09□□□□□ -1.75
LSM1O15116 AC092647.1-201ENST00000420654 287 ntBASIC4.09□□□□□ -1.75
LSM1O15116 RPL30P3-201ENST00000424262 333 ntBASIC4.09□□□□□ -1.75
LSM1O15116 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.09□□□□□ -1.75
LSM1O15116 MTCO1P52-201ENST00000433928 531 ntBASIC4.09□□□□□ -1.75
LSM1O15116 RPL23AP52-201ENST00000439311 478 ntBASIC4.09□□□□□ -1.75
LSM1O15116 RPL23AP89-201ENST00000439324 255 ntBASIC4.09□□□□□ -1.75
LSM1O15116 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM1O15116 AC023512.1-201ENST00000444513 499 ntBASIC4.09□□□□□ -1.75
LSM1O15116 ARL2BPP10-201ENST00000446487 531 ntBASIC4.09□□□□□ -1.75
LSM1O15116 RPL7L1P8-201ENST00000469911 741 ntBASIC4.09□□□□□ -1.75
LSM1O15116 AC010374.1-201ENST00000503762 1237 ntBASIC4.09□□□□□ -1.75
LSM1O15116 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LSM1O15116 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM1O15116 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.09□□□□□ -1.75
LSM1O15116 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM1O15116 AC113403.1-201ENST00000604910 193 ntBASIC4.09□□□□□ -1.75
LSM1O15116 AL161616.1-201ENST00000611867 286 ntBASIC4.09□□□□□ -1.75
LSM1O15116 AL049539.1-201ENST00000611964 459 ntBASIC4.09□□□□□ -1.75
LSM1O15116 MIR7973-1-201ENST00000614683 76 ntBASIC4.09□□□□□ -1.75
LSM1O15116 U7.8-201ENST00000619968 63 ntBASIC4.09□□□□□ -1.75
LSM1O15116 MIR7702-201ENST00000621931 59 ntBASIC4.09□□□□□ -1.75
LSM1O15116 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
LSM1O15116 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
LSM1O15116 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM1O15116 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LSM1O15116 AC100871.1-201ENST00000507871 1456 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms