Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 AL731532.2-201ENST00000623542 1953 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PCDH17O14917 RNU6-157P-201ENST00000383957 107 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 RNU6-178P-201ENST00000384631 104 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 SNORA68.2-201ENST00000391263 128 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL078599.1-201ENST00000402075 293 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 PRRC2CP1-201ENST00000404428 159 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL356131.1-201ENST00000405826 414 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL133264.1-201ENST00000407157 562 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 AC233981.1-201ENST00000423224 461 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 RPS26P47-201ENST00000427219 348 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 FABP7P2-201ENST00000429946 379 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 MTND1P32-201ENST00000433043 938 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 SETP8-201ENST00000435341 628 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 RPS29P10-201ENST00000439197 166 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 SETD6P1-201ENST00000444575 317 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 Z83846.1-201ENST00000446798 265 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 EEF1A1P1-201ENST00000447052 739 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 NOP56P2-201ENST00000447491 769 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 RPL23AP15-201ENST00000450202 459 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AC104634.1-201ENST00000452720 462 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 PPIAP21-201ENST00000464473 501 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 GAPDHP36-201ENST00000480688 918 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AC058823.1-201ENST00000485315 474 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 RPS3AP22-201ENST00000488297 769 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PCDH17O14917 OR5H4P-201ENST00000510851 923 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 RNU6-885P-201ENST00000516607 104 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 AP001922.4-201ENST00000526967 290 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AC007834.2-201ENST00000536310 343 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PCDH17O14917 AC005539.1-201ENST00000443768 1479 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 SMG1P4-204ENST00000523028 4131 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 AC025125.1-201ENST00000624743 1922 ntBASIC4.91□□□□□ -1.62
PCDH17O14917 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH17O14917 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH17O14917 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PCDH17O14917 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
PCDH17O14917 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PCDH17O14917 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PCDH17O14917 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH17O14917 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH17O14917 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDH17O14917 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDH17O14917 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDH17O14917 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH17O14917 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
PCDH17O14917 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDH17O14917 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH17O14917 RNU6-582P-201ENST00000362989 107 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 RN7SKP103-201ENST00000363848 320 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.9□□□□□ -1.63
PCDH17O14917 RNA5SP80-201ENST00000410475 111 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 PRELID3BP11-201ENST00000414230 479 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 RPL7P44-201ENST00000424827 742 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH17O14917 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH17O14917 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH17O14917 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH17O14917 RPL37P1-201ENST00000432310 284 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 MTND3P1-201ENST00000441336 220 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH17O14917 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDH17O14917 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH17O14917 COX6CP18-201ENST00000448769 222 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 HIGD1AP8-201ENST00000453927 274 ntBASIC4.9□□□□□ -1.63
PCDH17O14917 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms