Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC008837.2-201ENST00000513076 418 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 RNU6-885P-201ENST00000516607 104 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 RN7SKP66-201ENST00000516681 231 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXN3O00409 AP001207.1-201ENST00000524051 481 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 MTATP6P15-201ENST00000527233 835 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC023050.2-201ENST00000544968 387 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC012321.1-201ENST00000561622 1588 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC110743.1-201ENST00000584870 478 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC021171.1-201ENST00000603137 706 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AL353778.1-201ENST00000603149 408 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC092954.1-201ENST00000609121 445 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AP000894.4-201ENST00000610185 483 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 MIR6826-201ENST00000617808 98 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AL022401.1-201ENST00000619498 108 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC017037.3-201ENST00000625016 472 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXN3O00409 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
FOXN3O00409 Z95331.1-201ENST00000623075 23112 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXN3O00409 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC025574.1-201ENST00000554784 1653 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 C4BPAP1-201ENST00000415474 1893 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
FOXN3O00409 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 Y_RNA.192-201ENST00000363977 102 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 RNU6-619P-201ENST00000365146 108 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AL161909.1-201ENST00000397390 712 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AL133264.1-201ENST00000407157 562 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 SNORA11B-201ENST00000408175 129 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC107081.1-201ENST00000414975 361 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 TBCAP2-201ENST00000416175 326 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXN3O00409 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 MRPS36P1-201ENST00000421291 307 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC007394.1-201ENST00000421941 531 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC092162.1-201ENST00000432828 434 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 RPL7P34-201ENST00000433316 712 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC073143.1-201ENST00000436316 395 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.26□□□□□ -1.57
FOXN3O00409 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.26□□□□□ -1.57
FOXN3O00409 VPS26AP1-201ENST00000483197 979 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 HIGD1AP6-201ENST00000521833 279 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.26□□□□□ -1.57
FOXN3O00409 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.26□□□□□ -1.57
FOXN3O00409 HAUS8P1-201ENST00000549005 542 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC010198.2-201ENST00000550612 259 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC063949.1-201ENST00000552900 865 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXN3O00409 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
FOXN3O00409 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXN3O00409 TVP23CP2-201ENST00000571473 623 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC040904.1-201ENST00000590850 223 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC069304.3-201ENST00000603938 1084 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC087783.2-201ENST00000605070 562 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC080013.3-201ENST00000606839 578 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 AC234782.5-201ENST00000617723 324 ntBASIC5.26□□□□□ -1.57
FOXN3O00409 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXN3O00409 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXN3O00409 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXN3O00409 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 AC008758.3-201ENST00000507003 1829 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
FOXN3O00409 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 AL049737.1-201ENST00000413920 1403 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms