Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PDLIM1O00151 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC023141.6-201ENST00000429418 337 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 PRELID3BP10-201ENST00000431957 584 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC108463.1-201ENST00000450258 347 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 MTND2P30-201ENST00000456663 382 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC092905.1-201ENST00000467527 949 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 RNU6-347P-201ENST00000516658 105 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 IGKV2-23-201ENST00000518729 323 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 HAUS1P3-201ENST00000523909 662 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC008083.2-201ENST00000546707 476 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC105129.1-201ENST00000560250 297 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC079171.1-201ENST00000568788 914 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC022884.3-201ENST00000579571 248 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM1O00151 AC110792.4-201ENST00000609843 298 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 MIR6780A-201ENST00000615089 68 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC092628.2-201ENST00000622492 339 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 TNPO1P3-201ENST00000436471 2662 ntBASIC4.2□□□□□ -1.74
PDLIM1O00151 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM1O00151 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM1O00151 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC024341.1-201ENST00000526444 1552 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC139769.1-204ENST00000472297 1931 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC015813.6-201ENST00000624409 5808 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 MFSD8-216ENST00000641147 4009 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 PRO1804-201ENST00000623780 2050 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AL592437.2-201ENST00000421655 2434 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDLIM1O00151 MIR585-201ENST00000384887 94 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 RNU2-72P-201ENST00000411175 163 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 PTP4A1P5-201ENST00000420305 455 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC062016.2-201ENST00000420950 676 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC009965.2-201ENST00000425328 970 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AL590762.3-201ENST00000436372 640 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 MTCYBP21-201ENST00000443300 1113 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 HMGB3P8-201ENST00000449709 577 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AL353718.1-201ENST00000451028 517 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM1O00151 RPL7P48-201ENST00000461513 746 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC063949.1-201ENST00000552900 865 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AL110118.1-201ENST00000553543 400 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM1O00151 NPM1P47-201ENST00000560843 856 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM1O00151 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM1O00151 RN7SL690P-201ENST00000582087 240 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC069366.1-201ENST00000583159 838 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 CBX3P2-202ENST00000583365 535 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC092474.3-201ENST00000603022 568 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC004775.1-201ENST00000607389 753 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AL023583.1-201ENST00000607518 1143 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC011472.4-201ENST00000615848 491 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AP004607.9-201ENST00000618202 316 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 MIR6853-201ENST00000619642 74 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 AC090617.9-201ENST00000623751 147 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM1O00151 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDLIM1O00151 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM1O00151 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 USP8P1-201ENST00000494673 3183 ntBASIC4.19□□□□□ -1.74
PDLIM1O00151 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms