Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC090953.1-201ENST00000604305 1092 ntBASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 AC064801.1-201ENST00000612025 407 ntBASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 AC015722.2-201ENST00000622210 551 ntBASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 AC011944.2-201ENST00000624440 683 ntBASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DRB4X5D2U9 AC106871.1-201ENST00000568324 3102 ntBASIC3.09□□□□□ -1.92
HLA-DRB4X5D2U9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DRB4X5D2U9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.09□□□□□ -1.92
HLA-DRB4X5D2U9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DRB4X5D2U9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LINC00561-201ENST00000565815 2738 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC007685.1-201ENST00000329806 452 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AL161909.1-201ENST00000397390 712 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 RPL23AP38-201ENST00000423801 469 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 IFNNP1-201ENST00000429219 553 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 BMS1P19-201ENST00000433925 393 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 RN7SL93P-201ENST00000463035 293 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC109327.1-201ENST00000471666 403 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AF213884.1-201ENST00000488102 463 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC091167.1-201ENST00000492017 396 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 RPL29P14-201ENST00000495837 428 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC068305.1-201ENST00000497406 726 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC022655.2-201ENST00000577280 318 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC010200.2-201ENST00000605098 235 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 MIR8059-201ENST00000620427 81 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 MTCO1P14-201ENST00000441695 1559 ntBASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DRB4X5D2U9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 ERCC6-202ENST00000374127 1782 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 SNORA60-201ENST00000362396 134 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 RNU1-18P-201ENST00000363062 164 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 OR6C69P-201ENST00000394268 893 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AP000357.1-201ENST00000409926 1165 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 FAR2P2-201ENST00000413041 594 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL590806.1-201ENST00000415818 853 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC108032.1-201ENST00000416706 207 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL807761.1-201ENST00000417622 171 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL159169.1-201ENST00000421119 127 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 FAR2P4-202ENST00000425399 584 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC073143.1-201ENST00000436316 395 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 HMGB3P21-201ENST00000452483 547 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 RPL5P32-201ENST00000454085 879 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC010307.1-201ENST00000467206 836 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 RPL7P1-201ENST00000468161 747 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 RPL7P9-201ENST00000468715 747 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 USP9YP5-201ENST00000511770 630 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 FTH1P9-201ENST00000513251 355 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 TOMM20P2-201ENST00000540082 421 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC020763.5-201ENST00000623298 430 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC005261.4-201ENST00000600047 1385 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms