Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 ELOCP28-201ENST00000590044 317 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 RPL26P30-202ENST00000602923 645 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC005034.4-201ENST00000603612 899 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 OR2BH1P-201ENST00000608850 864 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC007546.2-201ENST00000623996 360 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL353743.4-201ENST00000422653 1547 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL049555.1-201ENST00000562834 1933 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 OR10J6P-201ENST00000289731 930 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RNU6-98P-201ENST00000384173 107 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RPL23AP59-201ENST00000399415 461 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AL078604.1-201ENST00000404609 466 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP146-201ENST00000410743 123 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ELOCP19-201ENST00000411919 318 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC004448.2-201ENST00000422360 586 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 PNRC2P1-201ENST00000423940 420 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 EIF2S2P3-201ENST00000428356 999 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC016712.1-201ENST00000431088 378 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ARL4AP3-201ENST00000441452 574 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 VN1R32P-201ENST00000452234 905 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 HMGB3P21-201ENST00000452483 547 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 DHFRP3-201ENST00000455595 559 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 RPL37P3-201ENST00000456825 293 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC012158.1-204ENST00000483430 465 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 IGKV2-36-201ENST00000519999 223 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC009643.1-201ENST00000532030 391 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC090515.3-201ENST00000560431 315 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC106785.3-201ENST00000564064 847 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 MIR4284-201ENST00000578924 81 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC005776.1-201ENST00000603164 290 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 Z98200.1-201ENST00000607298 470 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AL023881.1-201ENST00000621088 301 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC097372.4-201ENST00000625025 466 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 AC139713.2-214ENST00000642059 1811 ntBASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4BQ9Y4P1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC008033.1-201ENST00000216407 1162 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RNU6-792P-201ENST00000363490 107 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP28-201ENST00000363841 119 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 MIR3065-201ENST00000390137 79 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC009237.10-201ENST00000414112 510 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RPS12P5-201ENST00000423449 371 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 NIPA2P1-201ENST00000426223 976 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RNFT1P2-201ENST00000443064 757 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms