Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AL353748.1-201ENST00000440753 474 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AL513533.1-201ENST00000453728 415 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RPL5P32-201ENST00000454085 879 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC053481.1-201ENST00000467217 306 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RPL23AP2-201ENST00000471227 466 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RPL23AP72-201ENST00000492447 435 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 SUMO1P1-201ENST00000497904 306 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC231760.1-201ENST00000498002 260 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 ATP1B1P1-201ENST00000509767 915 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AP001160.4-201ENST00000596971 382 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC008638.3-201ENST00000603341 463 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC008782.1-201ENST00000603386 430 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC007546.1-201ENST00000619452 559 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RAD17P1-201ENST00000418130 2042 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 MFSD8-242ENST00000641690 4199 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP513-201ENST00000364648 118 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 MIR3065-201ENST00000390137 79 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 SNORD66.1-201ENST00000391230 76 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 HNRNPDP2-201ENST00000406475 478 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP39-201ENST00000411245 120 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 RPS23P10-201ENST00000416185 486 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 CYP4F29P-201ENST00000420685 446 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 FTH1P16-201ENST00000435241 552 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 USP9YP7-201ENST00000436723 430 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC114495.1-201ENST00000441274 436 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AL606490.8-201ENST00000441624 319 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 USP9YP32-201ENST00000452432 430 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AP000873.1-201ENST00000463987 400 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 RPS6P4-201ENST00000494693 758 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 IGKV2-36-201ENST00000519999 223 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AL109741.3-201ENST00000561748 592 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AC110792.4-201ENST00000609843 298 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 MIR7703-201ENST00000620784 77 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 MIR6730-201ENST00000622213 67 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 AL592148.3-201ENST00000608771 2646 ntBASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RHBDD3Q9Y3P4 ERCC6-202ENST00000374127 1782 ntBASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 NMD3P1-201ENST00000439704 1488 ntBASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 SNORD74.4-201ENST00000364129 80 ntBASIC3.76□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP505-201ENST00000364748 108 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms