Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC012414.2-201ENST00000559474 187 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC018552.3-201ENST00000567416 561 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 ELOCP28-201ENST00000590044 317 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 SNX6P1-201ENST00000601728 1224 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC019131.2-201ENST00000609071 870 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC239803.2-201ENST00000610161 430 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC105105.5-201ENST00000622635 1294 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC019080.5-201ENST00000624891 757 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC110792.3-201ENST00000595906 1614 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 USP9YP4-201ENST00000424401 1745 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC010329.2-201ENST00000595195 2737 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 RNU1-132P-201ENST00000364300 164 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL034403.1-201ENST00000399414 885 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 HSPD1P16-201ENST00000402302 394 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC093698.1-201ENST00000423843 571 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL590623.1-201ENST00000427864 105 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC007563.3-201ENST00000433233 371 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 RSL24D1P8-201ENST00000434442 492 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 EEF1A1P1-201ENST00000447052 739 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL162388.1-201ENST00000450912 352 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 CALM1P2-201ENST00000452941 448 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL354710.1-201ENST00000453641 246 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC069277.2-201ENST00000454211 432 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC104629.2-201ENST00000468627 598 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC008958.1-201ENST00000511047 682 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 RNU6-760P-201ENST00000516078 97 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 NARSP2-201ENST00000518524 679 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 OR4V1P-201ENST00000525394 1140 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC109635.6-201ENST00000525487 1113 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 BMS1P7-201ENST00000602440 1052 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 KATNBL1P1-201ENST00000605192 748 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC012467.1-201ENST00000607740 256 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC064801.1-201ENST00000612025 407 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL118556.2-201ENST00000614375 824 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC107308.1-201ENST00000615897 301 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AC092159.4-201ENST00000624944 550 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 PHKBP1-201ENST00000450951 1951 ntBASIC3.82□□□□□ -1.8
TRAPPC4Q9Y296 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 MIR421-201ENST00000365696 85 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 SNORA56-201ENST00000383966 129 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 MT-TP-201ENST00000387461 68 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 RNA5SP36-201ENST00000410197 133 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 RNU4-25P-201ENST00000410569 230 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 NRBF2P2-201ENST00000413087 861 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 MFSD13B-201ENST00000420133 1290 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC115285.1-201ENST00000424879 736 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 RPS3AP54-201ENST00000435535 734 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms