Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC124068.1-201ENST00000563131 678 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC090312.1-201ENST00000580637 348 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 ZNF92P3-201ENST00000596594 954 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC243654.2-201ENST00000612843 443 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC090617.9-201ENST00000623751 147 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC091948.2-201ENST00000636510 279 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 PHKBP1-201ENST00000450951 1951 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 GTF2H2B-203ENST00000508065 1432 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC025031.4-201ENST00000621248 3271 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 RNF6P1-201ENST00000444889 1784 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 Z98745.1-201ENST00000402553 494 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 HMGB1P13-201ENST00000406019 642 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 ARL2BPP3-201ENST00000421226 480 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 YWHAZP2-201ENST00000440317 728 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC104306.1-201ENST00000449702 371 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC108463.1-201ENST00000450258 347 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 FGF7P3-201ENST00000454645 303 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC108729.2-201ENST00000476543 840 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC104687.1-201ENST00000485829 412 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 UBA52P3-201ENST00000491303 382 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC111193.1-201ENST00000504097 155 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC106806.2-201ENST00000509365 500 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC007016.1-201ENST00000512110 244 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 HNRNPKP5-201ENST00000515300 253 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 SNORA31.13-201ENST00000516624 135 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC087272.1-201ENST00000523624 533 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 MIR3939-201ENST00000582614 106 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC115286.1-201ENST00000604298 434 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC135178.6-201ENST00000605314 398 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AL355816.1-201ENST00000607951 118 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 MIR7973-1-201ENST00000614683 76 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC131238.1-201ENST00000617135 328 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 AC011944.2-201ENST00000624440 683 ntBASIC4.13□□□□□ -1.75
RNF6Q9Y252 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF6Q9Y252 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF6Q9Y252 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC019155.1-201ENST00000382242 574 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC062016.2-201ENST00000420950 676 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 RPS24P8-201ENST00000431490 402 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 MED6P1-201ENST00000439659 713 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 RPL21P126-201ENST00000470049 478 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms