Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC012020.1-201ENST00000624541 1728 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLIP2Q9UDT6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLIP2Q9UDT6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLIP2Q9UDT6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 MT-TP-201ENST00000387461 68 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AL590806.1-201ENST00000415818 853 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 YY1P1-201ENST00000427625 668 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 NANOGP6-201ENST00000429190 847 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 VN1R48P-201ENST00000448149 1036 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC020898.1-201ENST00000474167 787 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 PRELID3BP7-201ENST00000503606 469 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC026402.1-201ENST00000513642 170 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 RNU6-751P-201ENST00000516382 101 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 NPM1P35-201ENST00000533043 868 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AL020997.2-201ENST00000602607 184 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC123786.2-201ENST00000603459 275 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 HMGB1P51-201ENST00000605166 638 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 MIR6867-201ENST00000610636 67 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 RMST_9.1-201ENST00000619945 193 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC112484.5-201ENST00000624189 228 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 AC092159.4-201ENST00000624944 550 ntBASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLIP2Q9UDT6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 SPRR2C-201ENST00000290702 219 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 RNU6-225P-201ENST00000384613 103 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 RN7SKP33-201ENST00000410942 340 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AC104306.1-201ENST00000449702 371 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 RPS29P19-201ENST00000479709 171 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AF213884.1-201ENST00000488102 463 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 OR5M7P-201ENST00000526140 972 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 OR1AB1P-201ENST00000585564 761 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLIP2Q9UDT6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AL049555.1-201ENST00000562834 1933 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 MIR372-201ENST00000362225 67 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 SNORA57.1-201ENST00000391227 145 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 RNA5SP39-201ENST00000411245 120 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AL356095.1-201ENST00000417217 199 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 RWDD4P2-201ENST00000426392 563 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 ELOCP18-201ENST00000434209 337 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC093716.1-201ENST00000435923 377 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC021205.1-201ENST00000468797 348 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms