Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 HSPA8P18-201ENST00000439846 1928 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL049555.1-201ENST00000562834 1933 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 RNU6-1243P-201ENST00000364028 107 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 RNU6-157P-201ENST00000383957 107 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 RNU1-106P-201ENST00000384382 164 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MIR649-201ENST00000384843 97 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MIR506-201ENST00000384998 124 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 ZNF603P-201ENST00000405613 487 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC093162.1-201ENST00000419682 124 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MTND2P16-201ENST00000419987 799 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL139421.1-201ENST00000423010 169 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL136231.1-201ENST00000429407 730 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MTND1P32-201ENST00000433043 938 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 H2AFZP6-201ENST00000444403 394 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 ANKRD26P4-201ENST00000455755 950 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 RN7SL97P-201ENST00000486780 299 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC005726.1-201ENST00000494679 427 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC091912.1-201ENST00000511351 248 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 OR4A43P-201ENST00000532938 908 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 PDCL2P2-201ENST00000533651 189 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC068993.1-201ENST00000546724 589 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AL161713.1-201ENST00000555538 145 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 SETP1-201ENST00000556014 845 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 MIR4504-201ENST00000577413 92 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC090312.1-201ENST00000580637 348 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MIR4660-201ENST00000583549 74 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC133552.5-201ENST00000604266 540 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC009597.2-201ENST00000604659 592 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 HSPE1P14-201ENST00000605812 302 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC092954.1-201ENST00000609121 445 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC004908.3-201ENST00000610248 625 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC100827.5-201ENST00000615883 426 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 BNIP3P41-202ENST00000616656 861 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 Z99129.2-201ENST00000619967 314 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC099494.2-201ENST00000623371 978 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AP002799.1-201ENST00000623552 423 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 AP001784.1-201ENST00000624107 428 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 FAM157B-203ENST00000639350 358 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRFN1Q9P244 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.86□□□□□ -1.63
LRFN1Q9P244 AC092747.4-201ENST00000620519 1861 ntBASIC4.86□□□□□ -1.63
LRFN1Q9P244 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 ABCC13-202ENST00000463099 3842 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 Y_RNA.25-201ENST00000362528 102 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 PPIAP9-201ENST00000403866 498 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms