Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 MTND1P33-201ENST00000446251 917 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AL139824.2-201ENST00000458731 1095 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC010326.1-201ENST00000462726 602 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 RPL12P20-201ENST00000475538 479 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC020699.1-201ENST00000505161 445 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 MTND3P12-201ENST00000559068 328 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC103792.1-201ENST00000603591 919 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC004948.1-201ENST00000609858 672 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AL161616.1-201ENST00000611867 286 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC023509.5-201ENST00000617434 807 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC055839.1-201ENST00000634467 498 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC119674.1-212ENST00000641155 993 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 A2MP1-204ENST00000566278 4130 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ASNSP1-201ENST00000518311 1939 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 KARSP3-201ENST00000571212 1504 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC108467.2-201ENST00000617640 1597 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 VN2R3P-201ENST00000422626 1412 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RNA5SP27-201ENST00000363839 119 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 SNORA71.2-201ENST00000364941 134 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RNU6-452P-201ENST00000384406 107 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RN7SKP216-201ENST00000411050 312 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 MTATP6P20-201ENST00000414147 562 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL592310.1-201ENST00000414330 671 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 UBTFL3-201ENST00000418934 1024 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL035246.1-201ENST00000433554 1255 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL357520.1-201ENST00000441557 453 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RPL34P26-201ENST00000445636 354 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 EIF2S2P2-201ENST00000447161 982 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 SBDSP1-204ENST00000453858 737 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 UBTFL6-201ENST00000477929 1024 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC093752.1-206ENST00000511823 336 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC007016.1-201ENST00000512110 244 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC008694.2-201ENST00000517591 306 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 EEF1A1P37-201ENST00000522748 715 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 OR8K4P-201ENST00000534608 872 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AL109741.3-201ENST00000561748 592 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC090312.1-201ENST00000580637 348 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC008536.1-201ENST00000602872 669 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC116651.1-201ENST00000609724 556 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC073569.3-201ENST00000619055 682 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 MIR7154-201ENST00000620673 73 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC090971.4-201ENST00000560291 1800 ntBASIC4.67□□□□□ -1.66
PCDH9Q9HC56 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH9Q9HC56 AC017007.4-201ENST00000503353 1352 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC139769.1-204ENST00000472297 1931 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 NXPH1-205ENST00000602349 1953 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 RNU6-666P-201ENST00000363499 107 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AL136131.1-201ENST00000406079 803 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 HMGB3P18-201ENST00000406327 590 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms