Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 UBTFL9-201ENST00000534504 1148 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ELOCP28-201ENST00000590044 317 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ZNF92P3-201ENST00000596594 954 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AL445363.3-201ENST00000623080 671 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC020763.5-201ENST00000623298 430 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC073342.3-201ENST00000624211 193 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC008785.1-201ENST00000624475 456 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC100871.1-201ENST00000507871 1456 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC097504.1-201ENST00000515103 2415 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 RNU1-14P-201ENST00000362759 152 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 MIR513A2-201ENST00000385249 127 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC244453.4-201ENST00000419150 388 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 RPS27AP7-201ENST00000422792 455 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AL031736.2-201ENST00000426573 787 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 RPS29P17-201ENST00000430795 166 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 RPS29P19-201ENST00000479709 171 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC006517.1-201ENST00000480485 328 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 PRELID3BP7-201ENST00000503606 469 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 OR4A2P-201ENST00000527276 913 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC068831.4-201ENST00000556118 109 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 MTND4LP24-201ENST00000572277 291 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AC110792.4-201ENST00000609843 298 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AP000346.3-201ENST00000622821 210 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.29□□□□□ -1.72
LRRC40Q9H9A6 AL158163.1-201ENST00000603915 1649 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RNA5SP36-201ENST00000410197 133 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RN7SKP235-201ENST00000410662 305 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RFESDP1-201ENST00000422350 461 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RPS6P12-201ENST00000432491 726 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 ELOCP18-201ENST00000434209 337 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 snoU13.1-201ENST00000459157 104 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RN7SL205P-201ENST00000490174 284 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC108157.1-201ENST00000510511 539 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RNU6-760P-201ENST00000516078 97 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 HMGB1P46-201ENST00000520062 610 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AP002812.4-201ENST00000532139 286 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 TRAV8-5-201ENST00000537369 341 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AC064801.1-201ENST00000612025 407 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RN7SL722P-201ENST00000617780 284 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RN7SL565P-201ENST00000618246 284 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 SAGE2P-201ENST00000420011 2126 ntBASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms