Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL133372.1-201ENST00000493565 745 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 RPL29P14-201ENST00000495837 428 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 DSTNP2-201ENST00000504533 515 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AP000255.1-201ENST00000610276 676 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC112484.5-201ENST00000624189 228 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC012020.1-201ENST00000624541 1728 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 RPS27AP11-201ENST00000402798 447 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AL035696.2-201ENST00000407941 709 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AL590806.1-201ENST00000415818 853 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC007389.2-201ENST00000434630 306 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AL451050.1-201ENST00000450126 415 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC091959.2-201ENST00000477363 321 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AGGF1P3-201ENST00000493675 1213 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 HPRT1P2-201ENST00000505250 544 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC112200.1-201ENST00000625015 234 ntBASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPF3BQ9BZI7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC093535.2-201ENST00000624769 2326 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 MT-RNR1-201ENST00000389680 954 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 HMGB3P5-201ENST00000428894 612 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 FCF1P7-201ENST00000451185 558 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AL132838.2-201ENST00000492041 314 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 RPS27AP13-201ENST00000498403 237 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC022968.1-201ENST00000567372 442 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC025627.2-201ENST00000576220 160 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 RN7SL600P-201ENST00000581811 299 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC128687.2-201ENST00000609657 566 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AL159169.2-201ENST00000610061 1269 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC074276.2-201ENST00000619891 348 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 AC106871.1-201ENST00000568324 3102 ntBASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPF3BQ9BZI7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC018555.1-201ENST00000567548 1980 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 RNA5SP502-201ENST00000362694 119 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms