Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 APOOP2-201ENST00000461561 539 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 RPS29P2-201ENST00000479278 136 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC006960.3-201ENST00000561845 705 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 MIR7702-201ENST00000621931 59 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC243312.2-201ENST00000623340 601 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC138907.10-201ENST00000623708 983 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 RPL7P60-201ENST00000397636 735 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC096664.2-201ENST00000411843 406 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 OR4K6P-201ENST00000416478 897 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 CYCSP35-201ENST00000451978 304 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 RN7SKP57-201ENST00000517248 293 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC007066.2-202ENST00000566531 914 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC079171.1-201ENST00000568788 914 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 AC097634.1-201ENST00000604491 2467 ntBASIC5.87□□□□□ -1.47
SCAPERQ9BY12 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.87□□□□□ -1.47
SCAPERQ9BY12 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 ZNF833P-201ENST00000424938 1494 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 MIR199A2-201ENST00000385289 110 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC097713.2-201ENST00000430199 356 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 RPS3AP46-201ENST00000448352 682 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 EIF4A1P11-201ENST00000451239 222 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 RPL6P9-201ENST00000466502 859 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 SETP14-201ENST00000497538 873 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC008694.2-201ENST00000517591 306 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AC244517.3-201ENST00000616254 1235 ntBASIC5.86□□□□□ -1.47
SCAPERQ9BY12 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCAPERQ9BY12 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 AL391219.1-201ENST00000422570 483 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 RPL21P11-201ENST00000461458 483 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 RN7SL601P-201ENST00000471221 293 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 RN7SKP13-201ENST00000515933 244 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 RNU1-103P-201ENST00000516502 125 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 GTF2IP8-201ENST00000560687 584 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 AC079880.2-201ENST00000603790 1213 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 AC119674.1-207ENST00000641355 633 ntBASIC5.85□□□□□ -1.47
SCAPERQ9BY12 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCAPERQ9BY12 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 EIF4EP1-201ENST00000422311 642 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 DPY19L1P2-201ENST00000426647 915 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC073387.1-201ENST00000453261 709 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC011270.1-201ENST00000558606 583 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC007599.1-201ENST00000568688 1174 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 AC244258.1-201ENST00000637553 1071 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.84□□□□□ -1.47
SCAPERQ9BY12 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCAPERQ9BY12 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCAPERQ9BY12 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.84□□□□□ -1.48
SCAPERQ9BY12 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms