Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 SNORA60-201ENST00000362396 134 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 SNORA11.1-201ENST00000408133 129 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 RNU2-22P-201ENST00000411266 212 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 PTP4A1P1-201ENST00000420539 515 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC018644.1-201ENST00000429934 551 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AL445584.1-201ENST00000431451 330 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC006011.1-201ENST00000442758 349 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 KRT19P6-201ENST00000510983 209 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AL121839.1-201ENST00000556233 1185 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AC008739.3-201ENST00000603262 127 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 AL159169.2-201ENST00000610061 1269 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 SNORA68.2-201ENST00000391263 128 ntBASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 AL691449.1-201ENST00000426570 421 ntBASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 ARL4AP4-201ENST00000434170 518 ntBASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.92□□□□□ -1.62
RPAP1Q9BWH6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 SNORA71.3-201ENST00000362582 128 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 GCNT6-201ENST00000379591 934 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC011742.1-201ENST00000431448 434 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 IGKV2-23-201ENST00000518729 323 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 MTND1P6-201ENST00000523621 946 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 MIR5684-201ENST00000585074 65 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 NF1P10-201ENST00000613227 742 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC131238.1-201ENST00000617135 328 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC004777.1-201ENST00000624317 287 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC012442.3-202ENST00000636742 206 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC018555.1-201ENST00000567548 1980 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 MIR708-201ENST00000390708 88 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 MTND2P11-201ENST00000423638 648 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC104306.1-201ENST00000449702 371 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC110792.1-201ENST00000491826 472 ntBASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.91□□□□□ -1.62
RPAP1Q9BWH6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms