Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 RPL7P22-201ENST00000466005 733 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 RPL35AP15-201ENST00000468042 339 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 S100A11P1-201ENST00000477525 312 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 BNIP3P41-201ENST00000503774 571 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC004923.2-201ENST00000529649 369 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC006064.5-201ENST00000541782 248 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC007424.1-203ENST00000554613 687 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL109766.1-201ENST00000555080 552 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL109741.3-201ENST00000561748 592 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 MIR4489-201ENST00000578869 62 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC079587.1-201ENST00000603846 277 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR6R2P-201ENST00000609216 300 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL035461.2-201ENST00000619201 524 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC007546.1-201ENST00000619452 559 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL049777.1-201ENST00000622740 518 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC092079.1-201ENST00000558620 1985 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC095050.2-201ENST00000510748 1458 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RNA5SP397-201ENST00000391323 118 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC097374.1-203ENST00000400783 485 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 MTND2P9-201ENST00000422293 931 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 EIF1P3-201ENST00000423841 334 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC011742.1-201ENST00000431448 434 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 CEACAMP7-201ENST00000444105 496 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RPL5P13-201ENST00000462840 709 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC053481.1-201ENST00000467217 306 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC037198.2-201ENST00000478845 733 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC011005.3-201ENST00000491624 395 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 MTATP6P9-201ENST00000515039 680 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RNA5SP34-201ENST00000516887 130 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 OR5M2P-201ENST00000529003 936 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 OR5BC1P-201ENST00000529327 739 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC025918.2-201ENST00000558683 763 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AGGF1P8-201ENST00000562979 1000 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 BNIP3P39-201ENST00000601077 554 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 SNX6P1-201ENST00000601728 1224 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC110792.4-201ENST00000609843 298 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AL021997.2-201ENST00000615674 271 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC016957.2-201ENST00000616998 848 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AL138955.1-201ENST00000622881 1040 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AC010300.1-201ENST00000600671 5134 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 MTND4P9-201ENST00000507819 1346 ntBASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC28BQ9BUN5 AP001486.2-201ENST00000561652 5113 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 SNORA51.8-201ENST00000384234 132 ntBASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC28BQ9BUN5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms