Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC008083.2-201ENST00000546707 476 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC093014.1-201ENST00000548926 724 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC068831.4-201ENST00000556118 109 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC090312.1-201ENST00000580637 348 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC104662.1-201ENST00000604448 511 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AL451044.1-201ENST00000604867 238 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC015849.2-201ENST00000605738 409 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AL023583.1-201ENST00000607518 1143 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AL021707.7-201ENST00000607991 416 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AL645927.2-201ENST00000618350 349 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC145207.9-201ENST00000623802 325 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC097372.4-201ENST00000625025 466 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 AC090971.4-201ENST00000560291 1800 ntBASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDHD3Q9BSH5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC079741.1-201ENST00000321498 212 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RNA5SP513-201ENST00000364648 118 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 GCNT6-201ENST00000379591 934 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RPS16P5-201ENST00000406501 404 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 GAPDHP49-201ENST00000421421 961 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL391219.1-201ENST00000422570 483 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC023141.6-201ENST00000429418 337 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC087650.1-201ENST00000431445 468 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL513321.1-201ENST00000441175 761 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 MTND2P30-201ENST00000456663 382 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RPL36AP13-201ENST00000457490 317 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 CCDC75P1-201ENST00000469247 791 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RPL23AP71-201ENST00000470966 469 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RN7SL205P-201ENST00000490174 284 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RN7SL810P-201ENST00000493031 276 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC025768.1-201ENST00000510057 267 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RNU6-1102P-201ENST00000516149 96 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RNU7-143P-201ENST00000516781 65 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 RNU6-467P-201ENST00000517027 110 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC105233.3-201ENST00000531125 744 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 PDCD5P1-201ENST00000543528 309 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 GNRHR2P1-201ENST00000555315 631 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC024940.4-201ENST00000605507 246 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL096803.3-201ENST00000609032 532 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL049539.1-201ENST00000611964 459 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC100827.5-201ENST00000615883 426 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AL035461.2-201ENST00000619201 524 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 MIR4727-201ENST00000622232 55 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AC106730.3-201ENST00000624568 641 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 AP005264.7-201ENST00000625003 745 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 ERCC6-202ENST00000374127 1782 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 ZNF90P1-201ENST00000480493 1951 ntBASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDHD3Q9BSH5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.44□□□□□ -1.86
HDHD3Q9BSH5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.44□□□□□ -1.86
HDHD3Q9BSH5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms