Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC011453.2-201ENST00000603737 729 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL139089.1-201ENST00000620372 975 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AP000346.3-201ENST00000622821 210 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP319-201ENST00000362768 119 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL354868.1-201ENST00000417077 482 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL389915.1-201ENST00000422463 466 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC073614.1-201ENST00000438690 650 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC090013.1-201ENST00000485147 480 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC111193.1-201ENST00000504097 155 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC024558.1-201ENST00000505008 528 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC126615.2-201ENST00000553003 515 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 MIR3913-1-201ENST00000577744 102 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL512329.2-201ENST00000607350 548 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL359535.1-201ENST00000612100 1087 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 MFSD8-219ENST00000641228 2559 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AC025470.1-201ENST00000510053 2032 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP183-201ENST00000362452 119 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP30-201ENST00000365552 115 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AL356057.2-201ENST00000403318 432 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 RPL23AP47-201ENST00000408017 460 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AC109780.2-201ENST00000413467 845 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AC092651.1-201ENST00000426110 312 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AL022238.1-201ENST00000442557 355 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AC004129.2-201ENST00000457229 287 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 AC005532.2-201ENST00000467154 373 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.49□□□□□ -1.37
SYNGAP1Q96PV0 SLC25A15P5-201ENST00000508033 253 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms