Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL513174.1-201ENST00000423182 629 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC109583.1-201ENST00000432156 268 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL358934.1-201ENST00000432346 324 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL731534.1-201ENST00000434711 269 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL031663.1-201ENST00000437445 219 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL022578.1-201ENST00000439330 1433 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AP000542.1-201ENST00000448473 371 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL672138.1-201ENST00000450604 1015 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL445687.2-201ENST00000458156 728 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RPL21P71-201ENST00000465598 459 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RPL7P6-201ENST00000480903 738 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RPS3AP14-201ENST00000483907 780 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC012170.1-201ENST00000495139 359 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 HMGB1P29-201ENST00000505659 499 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC093815.1-201ENST00000508637 280 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC109481.1-201ENST00000509173 282 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 SAP18P1-201ENST00000512058 390 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC117529.2-201ENST00000512159 2068 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC024589.1-201ENST00000512207 263 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC006499.2-201ENST00000513470 337 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNA5SP438-201ENST00000516561 112 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 OR5AP1P-201ENST00000529730 940 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MIR4776-2-201ENST00000580204 80 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MIR4307-201ENST00000582802 84 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC008752.3-201ENST00000588113 712 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC104785.1-201ENST00000603220 588 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL139286.1-201ENST00000604465 483 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL136131.3-201ENST00000607600 188 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC128687.2-201ENST00000609657 566 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL096712.1-201ENST00000614561 159 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MLECP1-201ENST00000615893 709 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC025125.1-201ENST00000624743 1922 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AP003400.3-201ENST00000624904 346 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MIR193BHG-214ENST00000641765 509 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SELENOWP1-201ENST00000322792 252 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 Y_RNA.295-201ENST00000364918 102 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 BX295541.1-201ENST00000417774 250 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC004690.1-201ENST00000418216 328 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 NPM1P34-201ENST00000428821 893 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MTCO2P11-201ENST00000431069 680 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MTCYBP45-201ENST00000435243 565 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SKP1P1-201ENST00000438081 489 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MTND6P13-201ENST00000443510 523 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AL162739.1-201ENST00000450606 307 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SDC4P-201ENST00000453285 601 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 RPL23AP12-201ENST00000467573 473 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms