Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC011447.7-201ENST00000624228 1590 ntBASIC7.33□□□□□ -1.24
TRIM47Q96LD4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM47Q96LD4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM47Q96LD4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC074141.1-201ENST00000588129 2995 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC032011.1-201ENST00000611703 1549 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC005332.9-201ENST00000620266 2921 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC092447.10-201ENST00000620607 1652 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AL592429.1-201ENST00000403909 1473 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 OR52B3P-201ENST00000314715 928 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 RNA5SP346-201ENST00000363541 121 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SET-203ENST00000372688 801 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SNORD65.1-201ENST00000390889 71 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 PIGFP2-201ENST00000421400 651 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 DPY19L1P2-201ENST00000426647 915 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 BX890604.2-201ENST00000427883 474 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC009961.2-201ENST00000435771 251 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC234064.1-201ENST00000436312 247 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC063943.1-201ENST00000465434 453 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC011476.1-201ENST00000466725 307 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC114781.3-201ENST00000512083 142 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 RNA5SP438-201ENST00000516561 112 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC104986.1-201ENST00000517978 436 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC105031.1-201ENST00000518550 476 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC008429.4-201ENST00000521201 182 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 TPM3P3-201ENST00000521343 354 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC109635.4-202ENST00000531666 412 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MIR4489-201ENST00000578869 62 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AP005137.2-201ENST00000609238 400 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC245014.3-201ENST00000618589 347 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC231657.1-201ENST00000624313 397 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AL596275.2-208ENST00000641192 594 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC090337.1-201ENST00000579651 2074 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AL731556.1-201ENST00000394628 3711 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 DOCK11P1-201ENST00000553480 5932 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 SHQ1P1-201ENST00000437111 1544 ntBASIC7.32□□□□□ -1.24
TRIM47Q96LD4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM47Q96LD4 AC073342.2-201ENST00000595842 1800 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AC024560.2-201ENST00000507981 1497 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 RNY4P34-201ENST00000364779 95 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 Y_RNA.489-201ENST00000384410 101 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 RNU6-195P-201ENST00000411352 109 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 HMGB3P2-201ENST00000411913 584 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms