Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DUX4L52-201ENST00000549363 777 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC012435.1-202ENST00000568772 240 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 MIR4505-201ENST00000582238 73 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 MIR4697-201ENST00000582977 78 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC008814.1-201ENST00000603797 406 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AL121873.1-201ENST00000616013 524 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AL160394.1-201ENST00000624765 724 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 UGT2B26P-201ENST00000508672 1613 ntBASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHAMP1Q96JM3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC010266.2-201ENST00000564741 3255 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC026951.1-201ENST00000559530 2459 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC109315.1-201ENST00000584143 1347 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC100871.1-201ENST00000507871 1456 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 TAF9BP1-201ENST00000396646 746 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC013442.1-201ENST00000397347 228 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MIR1286-201ENST00000408112 78 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 PGBD4P8-201ENST00000412993 562 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AL161449.1-201ENST00000414531 1199 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC012075.1-201ENST00000436549 580 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MTND4P18-201ENST00000447010 465 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 KATNBL1P6-201ENST00000453433 915 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC037198.2-201ENST00000478845 733 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 ACTG1P13-201ENST00000486987 1043 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC004453.1-201ENST00000487895 408 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC087808.1-201ENST00000520501 361 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MTCYBP41-201ENST00000528913 1123 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 EIF1P6-201ENST00000600054 334 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 U73023.1-201ENST00000603134 700 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC128687.1-201ENST00000605304 619 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AL031775.1-201ENST00000607014 887 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AL391497.1-201ENST00000608671 547 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AL136981.2-201ENST00000617319 734 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC109583.2-201ENST00000617367 129 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC015804.1-201ENST00000622935 435 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 AC023421.1-201ENST00000590535 1785 ntBASIC6.05□□□□□ -1.44
CHAMP1Q96JM3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC235565.1-201ENST00000456962 1325 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 DCAF13P3-201ENST00000561147 1334 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 Y_RNA.41-201ENST00000362646 102 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 RNA5SP507-201ENST00000363603 121 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SNORA48.4-201ENST00000391089 134 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AL356967.1-201ENST00000406305 431 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 GAPDHP42-201ENST00000406848 981 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms