Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC006042.3-201ENST00000454684 1469 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC104454.1-201ENST00000421341 1401 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 USP9YP11-201ENST00000427537 717 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 CNOT7P1-201ENST00000429006 852 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC092162.1-201ENST00000432828 434 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 RPL21P110-201ENST00000433345 446 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 RPL12P46-201ENST00000436610 195 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 COX7BP2-201ENST00000437976 242 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 UBE2V1P5-201ENST00000440070 405 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 MYO5BP2-201ENST00000449815 1277 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 TPMTP4-201ENST00000450749 678 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 PRDX3P4-201ENST00000470828 747 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 RPL5P23-201ENST00000496040 868 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC140172.1-201ENST00000502928 141 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC118282.2-201ENST00000508739 374 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 FABP5P12-201ENST00000515543 389 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 RPL23AP53-201ENST00000521854 457 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AL390726.5-202ENST00000564800 256 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC090751.1-201ENST00000566966 267 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AL354943.1-201ENST00000572103 781 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC008088.1-201ENST00000580993 280 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC110743.1-201ENST00000584870 478 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 VN1R84P-201ENST00000593697 235 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC104687.2-201ENST00000604442 342 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 MEMO1P5-201ENST00000604810 406 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC087783.2-201ENST00000605070 562 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC023509.5-201ENST00000617434 807 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AC073869.10-201ENST00000642016 354 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 AL451142.2-201ENST00000429076 2090 ntBASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP3Q96JB5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC109780.1-201ENST00000451768 1344 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 FAM133CP-201ENST00000332869 704 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RNU6-707P-201ENST00000364647 95 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RNU6-146P-201ENST00000384602 108 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL078599.1-201ENST00000402075 293 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RPL23AP27-201ENST00000415161 451 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RPL21P43-201ENST00000425440 472 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL009174.1-201ENST00000426577 416 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL158073.1-201ENST00000426848 1104 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 MTCO1P3-201ENST00000429327 192 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RPS20P1-201ENST00000434853 354 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL627308.1-201ENST00000435693 821 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC092809.1-201ENST00000441469 474 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 GTF3AP5-201ENST00000442645 697 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 HMGB1P48-201ENST00000446155 598 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms