Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL139247.1-201ENST00000422768 325 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AC069285.2-201ENST00000440210 275 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL157884.3-201ENST00000448273 1184 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 RNU7-143P-201ENST00000516781 65 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 SNORA70.24-201ENST00000517233 118 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AC023389.2-201ENST00000580031 955 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL391261.4-201ENST00000616012 481 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AC015722.2-201ENST00000622210 551 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL773545.4-201ENST00000637262 310 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL513478.4-201ENST00000641636 310 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 MTND4P26-201ENST00000415971 1359 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 ENSAP1-201ENST00000392855 326 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 MIR5685-201ENST00000579080 79 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 ZNF415P1-201ENST00000582279 1166 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM3Q8TF72 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 OR8F1P-201ENST00000425243 930 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 NPM1P34-201ENST00000428821 893 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 CYCSP43-201ENST00000438233 310 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 VN1R105P-201ENST00000486595 910 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 IGKV2D-19-201ENST00000523346 262 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC005255.1-201ENST00000593748 216 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC091167.4-201ENST00000605079 184 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC015813.4-201ENST00000610469 179 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC079684.1-201ENST00000621405 437 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 MIR6500-201ENST00000622700 86 ntBASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM3Q8TF72 OR6C64P-201ENST00000419708 825 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC110792.1-201ENST00000491826 472 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC090136.1-201ENST00000520009 240 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 OR8I1P-201ENST00000529291 931 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC006042.3-201ENST00000454684 1469 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 NANOGP6-201ENST00000429190 847 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC091286.1-201ENST00000431233 461 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 RPL5P16-201ENST00000471467 790 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 AC244517.3-201ENST00000616254 1235 ntBASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM3Q8TF72 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 SNORA60-201ENST00000362396 134 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms