Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CLDND2Q8NHS1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDND2Q8NHS1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDND2Q8NHS1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLDND2Q8NHS1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 SNORA3C-201ENST00000408792 125 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC013470.3-201ENST00000420252 1194 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 RBMY1KP-201ENST00000423480 476 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 OR8F1P-201ENST00000425243 930 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 RAB9AP5-201ENST00000437794 597 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AL356535.1-201ENST00000440335 398 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 RAB9AP2-201ENST00000443911 597 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 MTND4LP12-201ENST00000448237 295 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 FCF1P7-201ENST00000451185 558 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 OR52Y1P-201ENST00000452418 828 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 MTND6P32-201ENST00000457611 483 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 RPL38P1-201ENST00000460914 211 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 VN1R105P-201ENST00000486595 910 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC020593.1-201ENST00000507399 299 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 FTH1P21-201ENST00000512179 511 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC141257.3-201ENST00000572906 215 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC053481.4-201ENST00000583164 216 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC096553.1-201ENST00000605169 829 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC034229.5-201ENST00000624258 185 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC116667.1-201ENST00000604855 2072 ntBASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDND2Q8NHS1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 USP9YP4-201ENST00000424401 1745 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 RNU6-1331P-201ENST00000363658 106 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 RN7SKP202-201ENST00000410439 330 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 TPT1P2-201ENST00000413105 503 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC115285.1-201ENST00000424879 736 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 HSPE1P22-201ENST00000456856 327 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC108145.1-201ENST00000503770 153 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC010460.1-201ENST00000507087 466 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC107918.3-201ENST00000533272 382 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 SNORD39.2-201ENST00000579995 76 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 MIR486-1-201ENST00000612171 68 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 CDRT1-208ENST00000630868 794 ntBASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CLDND2Q8NHS1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 CASC19-261ENST00000641853 1638 ntBASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 HSPA8P17-201ENST00000427029 1382 ntBASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 RNU4-6P-201ENST00000410804 122 ntBASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 IPMKP1-201ENST00000425988 855 ntBASIC3.44□□□□□ -1.86
CLDND2Q8NHS1 HMGB3P10-201ENST00000434734 572 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms