Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 RNU1-106P-201ENST00000384382 164 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ATF1P1-201ENST00000406040 927 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 RNU4-34P-201ENST00000410431 124 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL161631.1-201ENST00000417933 486 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC092647.1-201ENST00000420654 287 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL049745.1-201ENST00000433953 286 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 GSTA7P-201ENST00000438425 448 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 RPL23AP93-201ENST00000440847 484 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 TRY2P-201ENST00000448860 689 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 RPS27AP17-201ENST00000463344 455 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC139783.2-201ENST00000504847 1145 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ATP5LP3-201ENST00000514223 304 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC027338.1-201ENST00000514840 825 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 SOX5P1-201ENST00000524155 1127 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 OR4C2P-201ENST00000530855 1064 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC063949.1-201ENST00000552900 865 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL121594.4-201ENST00000556211 1196 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 TMF1P1-201ENST00000576058 373 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 MIR3691-201ENST00000578066 90 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AL512782.1-201ENST00000603093 364 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC100847.1-201ENST00000611316 481 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AP002799.1-201ENST00000623552 423 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC020978.9-201ENST00000624380 1141 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 AC138393.1-206ENST00000540997 1886 ntBASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC71LQ8N9Z2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC066616.2-201ENST00000559334 1481 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 HMGB1P10-201ENST00000395823 563 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01347-201ENST00000417964 355 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC023128.2-201ENST00000420880 1223 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AL732292.1-201ENST00000426692 226 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 YWHAEP5-201ENST00000431545 765 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 MED6P1-201ENST00000439659 713 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC097499.1-201ENST00000444277 208 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RN7SL174P-201ENST00000475578 289 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RPL23AP73-201ENST00000492507 471 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC104109.1-201ENST00000498563 436 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 MTND4LP2-201ENST00000502312 285 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 BTF3P13-201ENST00000513224 490 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RN7SKP276-201ENST00000516242 268 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC025260.1-201ENST00000548858 430 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 HAUS8P1-201ENST00000549005 542 ntBASIC3.63□□□□□ -1.83
CCDC71LQ8N9Z2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms