Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC017104.4-201ENST00000636283 1592 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 CASC19-206ENST00000641028 1430 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 CCT8P1-201ENST00000413611 1657 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SNORD113-6-201ENST00000363345 75 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SNORD116.1-201ENST00000365628 92 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 MIR320B1-201ENST00000390209 79 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 HNRNPDP2-201ENST00000406475 478 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 RNA5SP345-201ENST00000410646 108 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 RAP1BP1-201ENST00000412709 553 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 OR4K6P-201ENST00000416478 897 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL355433.1-201ENST00000422804 300 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 FGF7P5-201ENST00000441829 291 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC104978.1-201ENST00000449387 391 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 NECAP1P2-201ENST00000455668 727 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL133244.1-201ENST00000456007 258 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC018442.3-201ENST00000523025 183 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC090819.1-201ENST00000523800 1111 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AP000859.1-201ENST00000525536 307 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC022832.1-201ENST00000530718 645 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC122134.1-201ENST00000565664 1104 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC095057.3-201ENST00000567102 1157 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC021749.1-201ENST00000604322 607 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 DPRXP5-201ENST00000604662 539 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL583856.2-201ENST00000606298 543 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AP000255.1-201ENST00000610276 676 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC122108.2-201ENST00000611946 526 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 VN1R74P-201ENST00000613259 503 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC009237.17-201ENST00000618111 748 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AL158163.2-201ENST00000619110 700 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC145207.9-201ENST00000623802 325 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 ZNF663P-202ENST00000641770 1131 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 MTCO1P11-201ENST00000429111 1528 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 BX005019.1-201ENST00000561881 1810 ntBASIC4.49□□□□□ -1.69
CLIP4Q8N3C7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 IRF5P1-201ENST00000504852 2164 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC104446.1-201ENST00000613728 1321 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL590763.1-201ENST00000398297 1545 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RNU6-666P-201ENST00000363499 107 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 U8.4-201ENST00000363626 134 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RNU6-413P-201ENST00000384115 107 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RNU6-452P-201ENST00000384406 107 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RNU6-549P-201ENST00000384433 107 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms