Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 MIR1264-201ENST00000616374 69 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SIX1Q15475 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
SIX1Q15475 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SIX1Q15475 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 RNU6-792P-201ENST00000363490 107 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 RNU6-31P-201ENST00000384388 108 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 ELOCP19-201ENST00000411919 318 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC234781.4-201ENST00000419384 244 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 COX6CP17-201ENST00000421389 185 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 MTND4LP13-201ENST00000425022 298 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 C4BPAP2-201ENST00000428434 478 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 RPL12P28-201ENST00000430852 489 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC011998.1-201ENST00000433403 117 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 RPS3AP54-201ENST00000435535 734 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AL158053.1-201ENST00000441503 453 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 FHP1-201ENST00000442741 703 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC092691.2-201ENST00000461787 803 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 SYT14P1-201ENST00000481459 721 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC041039.1-201ENST00000485656 536 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 RPS6P4-201ENST00000494693 758 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 SUMO1P1-201ENST00000497904 306 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC016550.1-201ENST00000505348 785 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 C1GALT1P3-201ENST00000522049 819 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 OSBPL9P3-201ENST00000534523 595 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX1Q15475 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC018552.1-201ENST00000562099 811 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC093510.2-201ENST00000562820 896 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 SNORD39.2-201ENST00000579995 76 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 MIR5096-201ENST00000583713 70 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX1Q15475 DNAJC19P3-201ENST00000594491 331 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 AC068790.5-201ENST00000602741 355 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC024933.1-201ENST00000608472 348 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC090246.1-201ENST00000616499 426 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 MIR6810-201ENST00000622701 70 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 RPL23AP61-201ENST00000623642 466 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SIX1Q15475 AC027228.2-201ENST00000567141 2154 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 AC017007.4-201ENST00000503353 1352 ntBASIC4.24□□□□□ -1.73
SIX1Q15475 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SIX1Q15475 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX1Q15475 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 AC116667.1-201ENST00000604855 2072 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX1Q15475 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX1Q15475 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX1Q15475 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.23□□□□□ -1.73
SIX1Q15475 AC233289.1-201ENST00000403700 508 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 UBE2D3P3-201ENST00000426992 425 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 AF228730.2-201ENST00000438784 848 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX1Q15475 AL353898.1-201ENST00000444055 238 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SIX1Q15475 TPT1P12-201ENST00000448968 492 ntBASIC4.23□□□□□ -1.73
SIX1Q15475 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX1Q15475 RPL23AP24-201ENST00000458203 385 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms