Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL022722.2-201ENST00000402519 180 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC092647.1-201ENST00000420654 287 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC244033.1-201ENST00000426826 870 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.64□□□□□ -1.83
H3F3AP84243 RPS6P12-201ENST00000432491 726 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.64□□□□□ -1.83
H3F3AP84243 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC092691.2-201ENST00000461787 803 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 RPL23AP71-201ENST00000470966 469 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.64□□□□□ -1.83
H3F3AP84243 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC025554.1-201ENST00000505641 188 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC111000.5-201ENST00000506559 1178 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC092593.2-201ENST00000513866 913 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.64□□□□□ -1.83
H3F3AP84243 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC092851.1-201ENST00000535964 478 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC025423.2-201ENST00000537570 439 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC135001.1-201ENST00000544546 283 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC079171.1-201ENST00000568788 914 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.64□□□□□ -1.83
H3F3AP84243 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.64□□□□□ -1.83
H3F3AP84243 AC090953.1-201ENST00000604305 1092 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC104662.1-201ENST00000604448 511 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC010200.2-201ENST00000605098 235 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 AC090246.1-201ENST00000616499 426 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.64□□□□□ -1.83
H3F3AP84243 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.64□□□□□ -1.83
H3F3AP84243 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
H3F3AP84243 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
H3F3AP84243 AC010329.2-201ENST00000595195 2737 ntBASIC3.64□□□□□ -1.83
H3F3AP84243 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 RNA5SP317-201ENST00000410176 116 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RN7SKP56-201ENST00000410513 331 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RNA5SP311-201ENST00000411290 116 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RAB28P1-201ENST00000411517 641 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 HSPE1P12-201ENST00000412576 301 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC115285.1-201ENST00000424879 736 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AL138785.1-201ENST00000425821 331 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.63□□□□□ -1.83
H3F3AP84243 FCF1P7-201ENST00000451185 558 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RPS7P7-201ENST00000463499 571 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.63□□□□□ -1.83
H3F3AP84243 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 IGBP1P5-201ENST00000507524 1000 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RNA5SP315-201ENST00000516340 116 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 RNA5SP312-201ENST00000517068 116 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.63□□□□□ -1.83
H3F3AP84243 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AL591034.3-201ENST00000605511 685 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 MIR6867-201ENST00000610636 67 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 AC009229.4-201ENST00000623854 1947 ntBASIC3.63□□□□□ -1.83
H3F3AP84243 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.63□□□□□ -1.83
H3F3AP84243 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
H3F3AP84243 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.63□□□□□ -1.83
H3F3AP84243 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3AP84243 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3AP84243 AC134882.1-201ENST00000603738 1676 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
H3F3AP84243 RNA5SP130-201ENST00000364431 114 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3AP84243 RCC2P2-201ENST00000422174 918 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3AP84243 VDAC1P6-201ENST00000430062 855 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 MTCO1P54-201ENST00000430139 712 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC092013.1-201ENST00000438795 332 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 VN1R96P-201ENST00000446052 858 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3AP84243 AC239809.1-201ENST00000450470 217 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3AP84243 FABP3P2-201ENST00000453169 399 ntBASIC3.62□□□□□ -1.83
H3F3AP84243 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms