Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC022916.3-201ENST00000592961 742 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AC064801.1-201ENST00000612025 407 ntBASIC3.54□□□□□ -1.84
UBA52P62987 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 AC022960.2-201ENST00000616300 666 ntBASIC3.54□□□□□ -1.84
UBA52P62987 MIR8059-201ENST00000620427 81 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 AC134882.1-201ENST00000603738 1676 ntBASIC3.54□□□□□ -1.84
UBA52P62987 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 AC092111.2-201ENST00000611627 1414 ntBASIC3.53□□□□□ -1.84
UBA52P62987 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.53□□□□□ -1.84
UBA52P62987 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.53□□□□□ -1.84
UBA52P62987 LARP1BP1-201ENST00000506036 1359 ntBASIC3.53□□□□□ -1.84
UBA52P62987 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.53□□□□□ -1.84
UBA52P62987 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 AL158163.1-201ENST00000603915 1649 ntBASIC3.53□□□□□ -1.84
UBA52P62987 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
UBA52P62987 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 SNORD66.1-201ENST00000391230 76 ntBASIC3.53□□□□□ -1.84
UBA52P62987 SNORA11F-201ENST00000408237 128 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.53□□□□□ -1.84
UBA52P62987 RWDD4P2-201ENST00000426392 563 ntBASIC3.53□□□□□ -1.84
UBA52P62987 NFYAP1-201ENST00000431953 972 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC096638.2-201ENST00000434965 711 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 PPIAP15-201ENST00000479662 484 ntBASIC3.53□□□□□ -1.84
UBA52P62987 RWDD4P1-201ENST00000488019 565 ntBASIC3.53□□□□□ -1.84
UBA52P62987 RPL35P6-201ENST00000490024 372 ntBASIC3.53□□□□□ -1.84
UBA52P62987 RN7SL604P-201ENST00000492589 296 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.53□□□□□ -1.84
UBA52P62987 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.53□□□□□ -1.84
UBA52P62987 MTND4LP31-201ENST00000514859 294 ntBASIC3.53□□□□□ -1.84
UBA52P62987 IGKV2-38-201ENST00000517443 247 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.53□□□□□ -1.84
UBA52P62987 MTCO1P49-201ENST00000523429 802 ntBASIC3.53□□□□□ -1.84
UBA52P62987 DEFB109D-201ENST00000529497 240 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.53□□□□□ -1.84
UBA52P62987 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 TVP23BP1-201ENST00000557500 617 ntBASIC3.53□□□□□ -1.84
UBA52P62987 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.53□□□□□ -1.84
UBA52P62987 AC006130.2-201ENST00000586202 326 ntBASIC3.53□□□□□ -1.84
UBA52P62987 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.53□□□□□ -1.84
UBA52P62987 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.53□□□□□ -1.84
UBA52P62987 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBA52P62987 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
UBA52P62987 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
UBA52P62987 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.53□□□□□ -1.84
UBA52P62987 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.53□□□□□ -1.84
UBA52P62987 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
UBA52P62987 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
UBA52P62987 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.85
UBA52P62987 HSPD1P11-201ENST00000508643 1702 ntBASIC3.53□□□□□ -1.85
UBA52P62987 CYP1D1P-201ENST00000416662 1433 ntBASIC3.53□□□□□ -1.85
UBA52P62987 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
UBA52P62987 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBA52P62987 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBA52P62987 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBA52P62987 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBA52P62987 RNU6-729P-201ENST00000384399 107 ntBASIC3.52□□□□□ -1.85
UBA52P62987 MIR554-201ENST00000384874 96 ntBASIC3.52□□□□□ -1.85
UBA52P62987 MIR3065-201ENST00000390137 79 ntBASIC3.52□□□□□ -1.85
UBA52P62987 HMGN2P8-201ENST00000391458 268 ntBASIC3.52□□□□□ -1.85
UBA52P62987 RN7SKP202-201ENST00000410439 330 ntBASIC3.52□□□□□ -1.85
UBA52P62987 RPS20P14-201ENST00000412545 360 ntBASIC3.52□□□□□ -1.85
UBA52P62987 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.52□□□□□ -1.85
UBA52P62987 COX6CP15-201ENST00000426313 211 ntBASIC3.52□□□□□ -1.85
UBA52P62987 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.52□□□□□ -1.85
UBA52P62987 AC034236.1-201ENST00000469891 373 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AL132838.2-201ENST00000492041 314 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AP002812.1-201ENST00000495378 474 ntBASIC3.52□□□□□ -1.85
UBA52P62987 RPL31P61-201ENST00000496160 376 ntBASIC3.52□□□□□ -1.85
UBA52P62987 HPRT1P2-201ENST00000505250 544 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AC008958.1-201ENST00000511047 682 ntBASIC3.52□□□□□ -1.85
UBA52P62987 KCTD9P2-201ENST00000512203 1013 ntBASIC3.52□□□□□ -1.85
UBA52P62987 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.52□□□□□ -1.85
UBA52P62987 AC023632.4-201ENST00000517783 191 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AGGF1P8-201ENST00000562979 1000 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.52□□□□□ -1.85
UBA52P62987 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.52□□□□□ -1.85
UBA52P62987 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBA52P62987 MRPS35P3-201ENST00000603189 709 ntBASIC3.52□□□□□ -1.85
UBA52P62987 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.52□□□□□ -1.85
UBA52P62987 uc_338.32-201ENST00000615087 172 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AL356863.1-201ENST00000623378 1080 ntBASIC3.52□□□□□ -1.85
UBA52P62987 AC112484.5-201ENST00000624189 228 ntBASIC3.52□□□□□ -1.85
UBA52P62987 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms