Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AP1S1P61966 MIR372-201ENST00000362225 67 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 MIR93-201ENST00000385024 80 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.03□□□□□ -1.76
AP1S1P61966 RPL7AP73-201ENST00000413490 353 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
AP1S1P61966 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S1P61966 ELOCP3-201ENST00000439303 348 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 AL451050.1-201ENST00000450126 415 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 AC092045.1-201ENST00000495716 1231 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.03□□□□□ -1.76
AP1S1P61966 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.03□□□□□ -1.76
AP1S1P61966 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S1P61966 AC067959.1-201ENST00000604334 379 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
AP1S1P61966 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 AC095038.2-201ENST00000621464 1070 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
AP1S1P61966 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S1P61966 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.03□□□□□ -1.76
AP1S1P61966 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.77
AP1S1P61966 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.77
AP1S1P61966 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
AP1S1P61966 AL451142.2-201ENST00000429076 2090 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S1P61966 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S1P61966 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S1P61966 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 OR8F1P-201ENST00000425243 930 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.02□□□□□ -1.77
AP1S1P61966 ELOCP18-201ENST00000434209 337 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 RPL12P46-201ENST00000436610 195 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 ELOCP8-201ENST00000439309 332 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 ELOCP15-201ENST00000442090 332 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 GNRHR2P1-201ENST00000555315 631 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.02□□□□□ -1.77
AP1S1P61966 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.02□□□□□ -1.77
AP1S1P61966 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.02□□□□□ -1.77
AP1S1P61966 SNX6P1-201ENST00000601728 1224 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC010857.1-201ENST00000606398 594 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC128687.2-201ENST00000609657 566 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.02□□□□□ -1.77
AP1S1P61966 MIR6500-201ENST00000622700 86 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 AC095050.2-201ENST00000510748 1458 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
AP1S1P61966 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S1P61966 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 AP002001.2-201ENST00000529025 1469 ntBASIC4.01□□□□□ -1.77
AP1S1P61966 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.01□□□□□ -1.77
AP1S1P61966 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.01□□□□□ -1.77
AP1S1P61966 RNA5SP283-201ENST00000365604 119 ntBASIC4.01□□□□□ -1.77
AP1S1P61966 RHOT1P2-201ENST00000366423 333 ntBASIC4.01□□□□□ -1.77
AP1S1P61966 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.01□□□□□ -1.77
AP1S1P61966 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.01□□□□□ -1.77
AP1S1P61966 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
AP1S1P61966 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 MIR513A2-201ENST00000385249 127 ntBASIC4.01□□□□□ -1.77
AP1S1P61966 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
AP1S1P61966 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.01□□□□□ -1.77
AP1S1P61966 AC007064.3-201ENST00000422608 359 ntBASIC4.01□□□□□ -1.77
AP1S1P61966 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.01□□□□□ -1.77
AP1S1P61966 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.01□□□□□ -1.77
AP1S1P61966 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.01□□□□□ -1.77
AP1S1P61966 AC083863.1-201ENST00000438811 231 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms