Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 XKRYP4-201ENST00000414395 483 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.97□□□□□ -1.93
CKS1BP61024 BX510359.2-201ENST00000417920 305 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS1BP61024 RBMY2QP-201ENST00000429799 1147 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 CDY14P-201ENST00000431260 1014 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS1BP61024 CDY12P-201ENST00000440679 1015 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 CDY13P-201ENST00000445813 1015 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 XKRYP5-201ENST00000449659 483 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 CDY23P-201ENST00000451661 1014 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS1BP61024 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS1BP61024 MTCO3P16-201ENST00000454456 754 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 RN7SL812P-201ENST00000493791 279 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 SCARNA22-201ENST00000503991 125 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 BTF3P13-201ENST00000513224 490 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AC005000.1-201ENST00000536192 288 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 GCSHP4-201ENST00000538792 439 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AL110118.1-201ENST00000553543 400 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC2.97□□□□□ -1.93
CKS1BP61024 BGLT3-201ENST00000564523 994 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AC010735.1-201ENST00000567305 1026 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.97□□□□□ -1.93
CKS1BP61024 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS1BP61024 AL592494.3-201ENST00000609485 464 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CKS1BP61024 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
CKS1BP61024 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.97□□□□□ -1.93
CKS1BP61024 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.97□□□□□ -1.93
CKS1BP61024 INTS6P1-201ENST00000504674 2530 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CKS1BP61024 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CKS1BP61024 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
CKS1BP61024 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
CKS1BP61024 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CKS1BP61024 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 BDP1P-201ENST00000582658 1990 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 RNA5SP123-201ENST00000363244 119 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 RNA5SP507-201ENST00000363603 121 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 RN7SKP15-201ENST00000364742 309 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 RNA5SP332-201ENST00000391063 115 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 COX6B1P1-201ENST00000415962 213 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 EIF1P3-201ENST00000423841 334 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 CHEK2P5-201ENST00000423877 246 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 KRTAP8-2P-201ENST00000440620 186 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 TPTE2P3-201ENST00000441562 1189 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC144530.1-201ENST00000452862 555 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC079804.1-201ENST00000461922 436 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 RN7SL93P-201ENST00000463035 293 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC006511.1-201ENST00000470614 315 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC006499.3-201ENST00000506077 748 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC008033.2-201ENST00000542626 177 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC106785.3-201ENST00000564064 847 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS1BP61024 NF1P5-201ENST00000588287 448 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS1BP61024 AC011453.2-201ENST00000603737 729 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AL160290.3-201ENST00000604869 165 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC010201.1-201ENST00000605051 540 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 AC006065.6-201ENST00000625201 545 ntBASIC2.96□□□□□ -1.94
CKS1BP61024 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS1BP61024 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS1BP61024 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CKS1BP61024 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CKS1BP61024 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
CKS1BP61024 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CKS1BP61024 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms