Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
ACTBP60709 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.63□□□□□ -1.83
ACTBP60709 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ACTBP60709 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ACTBP60709 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ACTBP60709 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ACTBP60709 SNORA70F-201ENST00000384142 135 ntBASIC3.62□□□□□ -1.83
ACTBP60709 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
ACTBP60709 PRELID3BP11-201ENST00000414230 479 ntBASIC3.62□□□□□ -1.83
ACTBP60709 AP001324.1-201ENST00000428553 399 ntBASIC3.62□□□□□ -1.83
ACTBP60709 ATP5HP2-201ENST00000433885 485 ntBASIC3.62□□□□□ -1.83
ACTBP60709 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.62□□□□□ -1.83
ACTBP60709 RNU7-170P-201ENST00000459303 61 ntBASIC3.62□□□□□ -1.83
ACTBP60709 RPL7P22-201ENST00000466005 733 ntBASIC3.62□□□□□ -1.83
ACTBP60709 RPL35AP15-201ENST00000468042 339 ntBASIC3.62□□□□□ -1.83
ACTBP60709 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.62□□□□□ -1.83
ACTBP60709 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.62□□□□□ -1.83
ACTBP60709 AC027176.2-201ENST00000559166 746 ntBASIC3.62□□□□□ -1.83
ACTBP60709 MIR4700-201ENST00000578311 74 ntBASIC3.62□□□□□ -1.83
ACTBP60709 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 AC079587.1-201ENST00000603846 277 ntBASIC3.62□□□□□ -1.83
ACTBP60709 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 AL021997.2-201ENST00000615674 271 ntBASIC3.62□□□□□ -1.83
ACTBP60709 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 AP005264.7-201ENST00000625003 745 ntBASIC3.62□□□□□ -1.83
ACTBP60709 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTBP60709 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ACTBP60709 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
ACTBP60709 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 OR4K15-201ENST00000305051 1216 ntBASIC3.61□□□□□ -1.83
ACTBP60709 RNA5SP175-201ENST00000364275 119 ntBASIC3.61□□□□□ -1.83
ACTBP60709 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 MIR320B1-201ENST00000390209 79 ntBASIC3.61□□□□□ -1.83
ACTBP60709 RNU6-328P-201ENST00000390887 106 ntBASIC3.61□□□□□ -1.83
ACTBP60709 RPS16P5-201ENST00000406501 404 ntBASIC3.61□□□□□ -1.83
ACTBP60709 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AL159169.1-201ENST00000421119 127 ntBASIC3.61□□□□□ -1.83
ACTBP60709 UQCRBP1-201ENST00000421129 336 ntBASIC3.61□□□□□ -1.83
ACTBP60709 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AC011742.1-201ENST00000431448 434 ntBASIC3.61□□□□□ -1.83
ACTBP60709 BMS1P19-201ENST00000433925 393 ntBASIC3.61□□□□□ -1.83
ACTBP60709 AC096638.2-201ENST00000434965 711 ntBASIC3.61□□□□□ -1.83
ACTBP60709 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 ARL2BPP10-201ENST00000446487 531 ntBASIC3.61□□□□□ -1.83
ACTBP60709 KATNBL1P4-201ENST00000503545 918 ntBASIC3.61□□□□□ -1.83
ACTBP60709 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.61□□□□□ -1.83
ACTBP60709 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AC023141.12-201ENST00000512399 199 ntBASIC3.61□□□□□ -1.83
ACTBP60709 MTCO1P30-201ENST00000515244 580 ntBASIC3.61□□□□□ -1.83
ACTBP60709 CDH12P4-201ENST00000517835 295 ntBASIC3.61□□□□□ -1.83
ACTBP60709 CDH12P3-201ENST00000517935 295 ntBASIC3.61□□□□□ -1.83
ACTBP60709 CDH12P1-201ENST00000518435 295 ntBASIC3.61□□□□□ -1.83
ACTBP60709 NARSP2-201ENST00000518524 679 ntBASIC3.61□□□□□ -1.83
ACTBP60709 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
ACTBP60709 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTBP60709 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.61□□□□□ -1.83
ACTBP60709 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.61□□□□□ -1.83
ACTBP60709 AC104662.1-201ENST00000604448 511 ntBASIC3.61□□□□□ -1.83
ACTBP60709 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.61□□□□□ -1.83
ACTBP60709 AL354950.1-201ENST00000614150 568 ntBASIC3.61□□□□□ -1.83
ACTBP60709 RN7SL722P-201ENST00000617780 284 ntBASIC3.61□□□□□ -1.83
ACTBP60709 RN7SL565P-201ENST00000618246 284 ntBASIC3.61□□□□□ -1.83
ACTBP60709 AC007546.1-201ENST00000619452 559 ntBASIC3.61□□□□□ -1.83
ACTBP60709 AC138649.5-201ENST00000637456 137 ntBASIC3.61□□□□□ -1.83
ACTBP60709 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ACTBP60709 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTBP60709 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ACTBP60709 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
ACTBP60709 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
ACTBP60709 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
ACTBP60709 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ACTBP60709 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 MIR659-201ENST00000384963 97 ntBASIC3.6□□□□□ -1.83
ACTBP60709 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ACTBP60709 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ACTBP60709 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms