Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNA5SP130-201ENST00000364431 114 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX2P58304 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.96□□□□□ -1.78
VSX2P58304 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AL158073.1-201ENST00000426848 1104 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AC022022.1-201ENST00000430304 178 ntBASIC3.96□□□□□ -1.78
VSX2P58304 RPS20P1-201ENST00000434853 354 ntBASIC3.96□□□□□ -1.78
VSX2P58304 HLA-N-201ENST00000437516 135 ntBASIC3.96□□□□□ -1.78
VSX2P58304 RPL23AP89-201ENST00000439324 255 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AL035551.1-201ENST00000446931 348 ntBASIC3.96□□□□□ -1.78
VSX2P58304 RWDD4P1-201ENST00000488019 565 ntBASIC3.96□□□□□ -1.78
VSX2P58304 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX2P58304 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX2P58304 AC090281.1-201ENST00000523019 276 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX2P58304 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX2P58304 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.96□□□□□ -1.78
VSX2P58304 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.96□□□□□ -1.78
VSX2P58304 AC010857.1-201ENST00000606398 594 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AL133370.2-201ENST00000619934 439 ntBASIC3.96□□□□□ -1.78
VSX2P58304 AC112484.5-201ENST00000624189 228 ntBASIC3.96□□□□□ -1.78
VSX2P58304 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VSX2P58304 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VSX2P58304 AC116667.1-201ENST00000604855 2072 ntBASIC3.96□□□□□ -1.78
VSX2P58304 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
VSX2P58304 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VSX2P58304 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 SPRR2C-201ENST00000290702 219 ntBASIC3.95□□□□□ -1.78
VSX2P58304 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
VSX2P58304 OR11H4-201ENST00000315409 1082 ntBASIC3.95□□□□□ -1.78
VSX2P58304 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
VSX2P58304 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VSX2P58304 AL607077.1-201ENST00000401718 499 ntBASIC3.95□□□□□ -1.78
VSX2P58304 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
VSX2P58304 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
VSX2P58304 RN7SKP263-201ENST00000411194 309 ntBASIC3.95□□□□□ -1.78
VSX2P58304 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AC099336.2-201ENST00000422457 254 ntBASIC3.95□□□□□ -1.78
VSX2P58304 BX119904.1-201ENST00000432026 348 ntBASIC3.95□□□□□ -1.78
VSX2P58304 Z85994.2-201ENST00000434327 452 ntBASIC3.95□□□□□ -1.78
VSX2P58304 OR4C10P-201ENST00000434991 931 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AC006011.1-201ENST00000442758 349 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX2P58304 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.95□□□□□ -1.78
VSX2P58304 AC099560.2-201ENST00000457554 255 ntBASIC3.95□□□□□ -1.78
VSX2P58304 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 AC093824.1-201ENST00000508796 343 ntBASIC3.95□□□□□ -1.78
VSX2P58304 HNRNPKP5-201ENST00000515300 253 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.95□□□□□ -1.78
VSX2P58304 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.95□□□□□ -1.78
VSX2P58304 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX2P58304 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX2P58304 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX2P58304 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.95□□□□□ -1.78
VSX2P58304 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX2P58304 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.95□□□□□ -1.78
VSX2P58304 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AP001542.1-201ENST00000591314 200 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.95□□□□□ -1.78
VSX2P58304 MIR6867-201ENST00000610636 67 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AL590410.1-201ENST00000617925 333 ntBASIC3.95□□□□□ -1.78
VSX2P58304 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VSX2P58304 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX2P58304 AL133412.1-201ENST00000380194 2992 ntBASIC3.95□□□□□ -1.78
VSX2P58304 USP9YP4-201ENST00000424401 1745 ntBASIC3.95□□□□□ -1.78
VSX2P58304 AC092162.3-201ENST00000624511 1624 ntBASIC3.95□□□□□ -1.78
VSX2P58304 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 AC093311.1-201ENST00000506586 2021 ntBASIC3.94□□□□□ -1.78
VSX2P58304 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VSX2P58304 RNU6-1279P-201ENST00000383917 103 ntBASIC3.94□□□□□ -1.78
VSX2P58304 ENSAP1-201ENST00000392855 326 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.94□□□□□ -1.78
VSX2P58304 AL356095.1-201ENST00000417217 199 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 RPL17P36-201ENST00000420302 549 ntBASIC3.94□□□□□ -1.78
VSX2P58304 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 YY1P1-201ENST00000427625 668 ntBASIC3.94□□□□□ -1.78
VSX2P58304 RPS6P12-201ENST00000432491 726 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.94□□□□□ -1.78
VSX2P58304 AC093716.1-201ENST00000435923 377 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.94□□□□□ -1.78
VSX2P58304 RPL31P20-201ENST00000449593 360 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.94□□□□□ -1.78
VSX2P58304 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.94□□□□□ -1.78
VSX2P58304 RPL38P1-201ENST00000460914 211 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC139783.2-201ENST00000504847 1145 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.94□□□□□ -1.78
VSX2P58304 RNU6-319P-201ENST00000516025 108 ntBASIC3.94□□□□□ -1.78
VSX2P58304 SEC11B-201ENST00000518383 499 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.94□□□□□ -1.78
VSX2P58304 EIF1AXP2-201ENST00000555940 413 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.94□□□□□ -1.78
VSX2P58304 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms