Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IMMP1LP1-201ENST00000605170 488 ntBASIC4.53□□□□□ -1.68
CDH12P55289 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH12P55289 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH12P55289 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AF001550.2-201ENST00000636643 217 ntBASIC4.53□□□□□ -1.68
CDH12P55289 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 BTBD10P1-201ENST00000549824 1352 ntBASIC4.53□□□□□ -1.69
CDH12P55289 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 PABPC1P6-201ENST00000445594 1829 ntBASIC4.52□□□□□ -1.69
CDH12P55289 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDH12P55289 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CDH12P55289 RNU6-157P-201ENST00000383957 107 ntBASIC4.52□□□□□ -1.69
CDH12P55289 MIR16-1-201ENST00000385271 89 ntBASIC4.52□□□□□ -1.69
CDH12P55289 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH12P55289 AL590290.1-201ENST00000405336 380 ntBASIC4.52□□□□□ -1.69
CDH12P55289 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH12P55289 AC048351.1-201ENST00000420064 602 ntBASIC4.52□□□□□ -1.69
CDH12P55289 USP9YP26-201ENST00000421008 661 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AL365396.1-201ENST00000430854 671 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 CBX1P4-201ENST00000439415 457 ntBASIC4.52□□□□□ -1.69
CDH12P55289 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH12P55289 UBE2V1P5-201ENST00000440070 405 ntBASIC4.52□□□□□ -1.69
CDH12P55289 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.52□□□□□ -1.69
CDH12P55289 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH12P55289 OR7E125P-201ENST00000443450 846 ntBASIC4.52□□□□□ -1.69
CDH12P55289 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 ANKRD26P4-201ENST00000455755 950 ntBASIC4.52□□□□□ -1.69
CDH12P55289 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH12P55289 AC026348.1-201ENST00000462549 1053 ntBASIC4.52□□□□□ -1.69
CDH12P55289 RPL23AP12-201ENST00000467573 473 ntBASIC4.52□□□□□ -1.69
CDH12P55289 RN7SL346P-201ENST00000491561 294 ntBASIC4.52□□□□□ -1.69
CDH12P55289 SNRPCP2-201ENST00000504370 475 ntBASIC4.52□□□□□ -1.69
CDH12P55289 COX6B1P5-201ENST00000509843 249 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 MTCO3P28-201ENST00000513351 515 ntBASIC4.52□□□□□ -1.69
CDH12P55289 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 Y_RNA.719-201ENST00000517156 106 ntBASIC4.52□□□□□ -1.69
CDH12P55289 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 AL356057.1-201ENST00000533798 831 ntBASIC4.52□□□□□ -1.69
CDH12P55289 GCSHP4-201ENST00000538792 439 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH12P55289 AC004825.1-201ENST00000555068 586 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH12P55289 AC087465.1-201ENST00000560574 245 ntBASIC4.52□□□□□ -1.69
CDH12P55289 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH12P55289 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
CDH12P55289 MIR4310-201ENST00000582950 57 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 AC010620.1-201ENST00000601088 1102 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AL451064.1-201ENST00000607718 471 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC084782.3-201ENST00000612282 578 ntBASIC4.52□□□□□ -1.69
CDH12P55289 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH12P55289 AC015804.1-201ENST00000622935 435 ntBASIC4.52□□□□□ -1.69
CDH12P55289 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 SGO1P1-201ENST00000603525 1447 ntBASIC4.52□□□□□ -1.69
CDH12P55289 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH12P55289 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH12P55289 MTND5P31-201ENST00000419366 1374 ntBASIC4.52□□□□□ -1.69
CDH12P55289 AC025263.3-201ENST00000622965 1396 ntBASIC4.52□□□□□ -1.69
CDH12P55289 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 AC021242.1-201ENST00000507315 2035 ntBASIC4.51□□□□□ -1.69
CDH12P55289 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH12P55289 DCAF13P3-201ENST00000561147 1334 ntBASIC4.51□□□□□ -1.69
CDH12P55289 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CDH12P55289 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 DHX9P1-201ENST00000436565 3076 ntBASIC4.51□□□□□ -1.69
CDH12P55289 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 SNURFL-201ENST00000309296 343 ntBASIC4.51□□□□□ -1.69
CDH12P55289 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH12P55289 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH12P55289 RNU1-83P-201ENST00000363426 164 ntBASIC4.51□□□□□ -1.69
CDH12P55289 RNU6-560P-201ENST00000364007 108 ntBASIC4.51□□□□□ -1.69
CDH12P55289 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH12P55289 SKINT1L-201ENST00000401057 817 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms