Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC026616.1-201ENST00000523157 525 ntBASIC4.69□□□□□ -1.66
VCPP55072 OR7E10P-201ENST00000526420 991 ntBASIC4.69□□□□□ -1.66
VCPP55072 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.69□□□□□ -1.66
VCPP55072 AC017076.1-201ENST00000607613 578 ntBASIC4.69□□□□□ -1.66
VCPP55072 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.69□□□□□ -1.66
VCPP55072 AC005858.4-201ENST00000623191 700 ntBASIC4.69□□□□□ -1.66
VCPP55072 AL139254.3-201ENST00000641097 674 ntBASIC4.69□□□□□ -1.66
VCPP55072 AC010300.1-201ENST00000600671 5134 ntBASIC4.69□□□□□ -1.66
VCPP55072 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.69□□□□□ -1.66
VCPP55072 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.69□□□□□ -1.66
VCPP55072 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VCPP55072 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VCPP55072 AC027290.2-201ENST00000623210 18662 ntBASIC4.68□□□□□ -1.66
VCPP55072 AL049555.1-201ENST00000562834 1933 ntBASIC4.68□□□□□ -1.66
VCPP55072 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VCPP55072 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VCPP55072 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VCPP55072 NXPH1-205ENST00000602349 1953 ntBASIC4.68□□□□□ -1.66
VCPP55072 RNU1-132P-201ENST00000364300 164 ntBASIC4.68□□□□□ -1.66
VCPP55072 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VCPP55072 SNORA9-201ENST00000384215 133 ntBASIC4.68□□□□□ -1.66
VCPP55072 RNU1-44P-201ENST00000384453 163 ntBASIC4.68□□□□□ -1.66
VCPP55072 AL121834.1-202ENST00000404494 277 ntBASIC4.68□□□□□ -1.66
VCPP55072 MTND3P20-201ENST00000407663 186 ntBASIC4.68□□□□□ -1.66
VCPP55072 RPS3AP25-201ENST00000411660 793 ntBASIC4.68□□□□□ -1.66
VCPP55072 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
VCPP55072 AC114814.2-201ENST00000419195 485 ntBASIC4.68□□□□□ -1.66
VCPP55072 AC062016.2-201ENST00000420950 676 ntBASIC4.68□□□□□ -1.66
VCPP55072 OR2X1P-201ENST00000421144 687 ntBASIC4.68□□□□□ -1.66
VCPP55072 MTCO3P21-201ENST00000430791 643 ntBASIC4.68□□□□□ -1.66
VCPP55072 RPL23AP25-201ENST00000430973 463 ntBASIC4.68□□□□□ -1.66
VCPP55072 RNU6-1218P-201ENST00000458990 108 ntBASIC4.68□□□□□ -1.66
VCPP55072 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.68□□□□□ -1.66
VCPP55072 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.68□□□□□ -1.66
VCPP55072 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.68□□□□□ -1.66
VCPP55072 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.68□□□□□ -1.66
VCPP55072 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.68□□□□□ -1.66
VCPP55072 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.68□□□□□ -1.66
VCPP55072 BPIFA4P-203ENST00000603168 689 ntBASIC4.68□□□□□ -1.66
VCPP55072 PSMA6P4-201ENST00000603247 718 ntBASIC4.68□□□□□ -1.66
VCPP55072 MIR6875-201ENST00000617506 72 ntBASIC4.68□□□□□ -1.66
VCPP55072 AC009237.17-201ENST00000618111 748 ntBASIC4.68□□□□□ -1.66
VCPP55072 LINC01808-202ENST00000641680 1116 ntBASIC4.68□□□□□ -1.66
VCPP55072 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.68□□□□□ -1.66
VCPP55072 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
VCPP55072 AC139769.1-204ENST00000472297 1931 ntBASIC4.68□□□□□ -1.66
VCPP55072 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.67□□□□□ -1.66
VCPP55072 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VCPP55072 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.67□□□□□ -1.66
VCPP55072 LINC00622-201ENST00000562811 1570 ntBASIC4.67□□□□□ -1.66
VCPP55072 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VCPP55072 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VCPP55072 OR5T3-201ENST00000303059 1023 ntBASIC4.67□□□□□ -1.66
VCPP55072 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VCPP55072 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VCPP55072 RNA5SP22-201ENST00000365393 109 ntBASIC4.67□□□□□ -1.66
VCPP55072 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VCPP55072 MIR200C-201ENST00000384980 68 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC069157.1-201ENST00000421749 137 ntBASIC4.67□□□□□ -1.66
VCPP55072 CDY14P-201ENST00000431260 1014 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC007389.2-201ENST00000434630 306 ntBASIC4.67□□□□□ -1.66
VCPP55072 RPS29P7-201ENST00000439662 171 ntBASIC4.67□□□□□ -1.66
VCPP55072 CDY12P-201ENST00000440679 1015 ntBASIC4.67□□□□□ -1.66
VCPP55072 RPL6P5-201ENST00000445678 828 ntBASIC4.67□□□□□ -1.66
VCPP55072 CDY13P-201ENST00000445813 1015 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 CDY23P-201ENST00000451661 1014 ntBASIC4.67□□□□□ -1.66
VCPP55072 PSMC1P13-201ENST00000458195 985 ntBASIC4.67□□□□□ -1.66
VCPP55072 RPL23AP2-201ENST00000471227 466 ntBASIC4.67□□□□□ -1.66
VCPP55072 RPL7P49-201ENST00000471402 708 ntBASIC4.67□□□□□ -1.66
VCPP55072 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 AC010627.1-201ENST00000503819 1294 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.67□□□□□ -1.66
VCPP55072 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.67□□□□□ -1.66
VCPP55072 MIR4286-201ENST00000580651 93 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.67□□□□□ -1.66
VCPP55072 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.67□□□□□ -1.66
VCPP55072 AL118556.2-201ENST00000614375 824 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC023509.5-201ENST00000617434 807 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.67□□□□□ -1.66
VCPP55072 AP006248.2-201ENST00000623309 592 ntBASIC4.67□□□□□ -1.66
VCPP55072 AP003497.2-201ENST00000624220 967 ntBASIC4.67□□□□□ -1.66
VCPP55072 CDRT1-208ENST00000630868 794 ntBASIC4.67□□□□□ -1.66
VCPP55072 AC055839.1-201ENST00000634467 498 ntBASIC4.67□□□□□ -1.66
VCPP55072 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VCPP55072 Z73965.1-201ENST00000623412 2297 ntBASIC4.67□□□□□ -1.66
VCPP55072 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
VCPP55072 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VCPP55072 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VCPP55072 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VCPP55072 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VCPP55072 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VCPP55072 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms