Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA1P49639 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA1P49639 MTCYBP27-201ENST00000555160 670 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA1P49639 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
HOXA1P49639 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC100767.2-201ENST00000604840 693 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXA1P49639 AC080013.3-201ENST00000606839 578 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 AC100847.1-201ENST00000611316 481 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 MIR6861-201ENST00000618657 64 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 AC131159.1-201ENST00000621854 213 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 MIR4727-201ENST00000622232 55 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 AC004943.3-201ENST00000624116 600 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
HOXA1P49639 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA1P49639 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA1P49639 DDX18P5-201ENST00000534547 1306 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA1P49639 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HOXA1P49639 BX005019.1-201ENST00000561881 1810 ntBASIC4.14□□□□□ -1.75
HOXA1P49639 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA1P49639 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA1P49639 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC104454.1-201ENST00000421341 1401 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 AC006042.3-201ENST00000454684 1469 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AL133412.1-201ENST00000380194 2992 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 AP005901.5-201ENST00000545779 1796 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXA1P49639 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
HOXA1P49639 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 RNA5SP284-201ENST00000384547 118 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXA1P49639 RNU1-149P-201ENST00000390870 161 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA1P49639 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXA1P49639 CYP4F29P-201ENST00000420685 446 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 RPF2P1-201ENST00000424137 906 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC002069.1-201ENST00000429649 1159 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 SETP8-201ENST00000435341 628 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 SUMO2P3-201ENST00000438311 288 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 UBE2V1P5-201ENST00000440070 405 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC002542.1-201ENST00000440683 193 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 RPL23AP76-201ENST00000441860 458 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 RPL36AP39-201ENST00000445859 318 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 EXTL2P1-201ENST00000446218 416 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 Z83846.1-201ENST00000446798 265 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC004980.3-201ENST00000447046 365 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 RPL31P15-201ENST00000449770 338 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 Z99714.1-201ENST00000450463 807 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC007998.1-201ENST00000474156 672 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC087373.1-201ENST00000524920 491 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 MTND2P26-201ENST00000528255 1029 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC124293.1-201ENST00000530034 493 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC027544.3-201ENST00000535082 757 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC090695.1-201ENST00000561269 1222 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AL354943.1-201ENST00000572103 781 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 EIF1P6-201ENST00000600054 334 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA1P49639 AC011453.2-201ENST00000603737 729 ntBASIC4.13□□□□□ -1.75
HOXA1P49639 Z94722.1-201ENST00000604328 474 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms