Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRP9P49458 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.63□□□□□ -1.83
SRP9P49458 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SRP9P49458 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRP9P49458 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRP9P49458 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.63□□□□□ -1.83
SRP9P49458 BDP1P-201ENST00000582658 1990 ntBASIC3.63□□□□□ -1.83
SRP9P49458 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRP9P49458 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.63□□□□□ -1.83
SRP9P49458 AC090229.1-201ENST00000590983 1609 ntBASIC3.62□□□□□ -1.83
SRP9P49458 NOL8P1-201ENST00000508336 3529 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.62□□□□□ -1.83
SRP9P49458 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 MIR141-201ENST00000384975 95 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RNA5SP36-201ENST00000410197 133 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
SRP9P49458 MFSD13B-201ENST00000420133 1290 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RPL23AP38-201ENST00000423801 469 ntBASIC3.62□□□□□ -1.83
SRP9P49458 USP12PY-201ENST00000427677 1064 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC016712.1-201ENST00000431088 378 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.62□□□□□ -1.83
SRP9P49458 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.62□□□□□ -1.83
SRP9P49458 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.62□□□□□ -1.83
SRP9P49458 AC009220.1-201ENST00000451614 275 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RPL9P32-201ENST00000464118 620 ntBASIC3.62□□□□□ -1.83
SRP9P49458 UQCRHP4-201ENST00000471686 272 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RPS29P19-201ENST00000479709 171 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 HPRT1P1-201ENST00000509498 657 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC008958.1-201ENST00000511047 682 ntBASIC3.62□□□□□ -1.83
SRP9P49458 RNA5SP49-201ENST00000516450 115 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 IGKV2D-10-201ENST00000520194 281 ntBASIC3.62□□□□□ -1.83
SRP9P49458 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.62□□□□□ -1.83
SRP9P49458 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.62□□□□□ -1.83
SRP9P49458 AC079171.1-201ENST00000568788 914 ntBASIC3.62□□□□□ -1.83
SRP9P49458 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 AC010200.2-201ENST00000605098 235 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AC006338.2-201ENST00000616864 791 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AP000843.1-201ENST00000624880 701 ntBASIC3.62□□□□□ -1.83
SRP9P49458 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.62□□□□□ -1.83
SRP9P49458 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.62□□□□□ -1.83
SRP9P49458 AL773545.4-201ENST00000637262 310 ntBASIC3.62□□□□□ -1.83
SRP9P49458 AL513478.4-201ENST00000641636 310 ntBASIC3.62□□□□□ -1.83
SRP9P49458 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SRP9P49458 AC092079.1-201ENST00000558620 1985 ntBASIC3.62□□□□□ -1.83
SRP9P49458 ERCC6-202ENST00000374127 1782 ntBASIC3.61□□□□□ -1.83
SRP9P49458 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP9P49458 MIR383-201ENST00000362257 73 ntBASIC3.61□□□□□ -1.83
SRP9P49458 RNU1-132P-201ENST00000364300 164 ntBASIC3.61□□□□□ -1.83
SRP9P49458 U3.15-201ENST00000365398 212 ntBASIC3.61□□□□□ -1.83
SRP9P49458 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP9P49458 OR6C69P-201ENST00000394268 893 ntBASIC3.61□□□□□ -1.83
SRP9P49458 RN7SKP235-201ENST00000410662 305 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP9P49458 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP9P49458 HMGB3P5-201ENST00000428894 612 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP9P49458 TPT1P12-201ENST00000448968 492 ntBASIC3.61□□□□□ -1.83
SRP9P49458 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP9P49458 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 RNA5SP519-201ENST00000516480 119 ntBASIC3.61□□□□□ -1.83
SRP9P49458 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC008802.1-201ENST00000519121 791 ntBASIC3.61□□□□□ -1.83
SRP9P49458 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC138701.1-201ENST00000524329 714 ntBASIC3.61□□□□□ -1.83
SRP9P49458 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 MIR4458-201ENST00000578872 75 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC023575.1-201ENST00000580510 358 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.61□□□□□ -1.83
SRP9P49458 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP9P49458 AC005255.1-201ENST00000593748 216 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AL139041.1-201ENST00000605480 610 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AP003392.5-201ENST00000607857 415 ntBASIC3.61□□□□□ -1.83
SRP9P49458 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP9P49458 AC103710.3-201ENST00000608157 948 ntBASIC3.61□□□□□ -1.83
SRP9P49458 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 MIR3653-201ENST00000625572 110 ntBASIC3.61□□□□□ -1.83
SRP9P49458 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.61□□□□□ -1.83
SRP9P49458 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP9P49458 OR5AC4P-202ENST00000642086 985 ntBASIC3.61□□□□□ -1.83
SRP9P49458 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP9P49458 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SRP9P49458 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms