Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 MTCO1P40-201ENST00000574371 625 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC009948.4-201ENST00000604692 675 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 BNIP3P4-201ENST00000604946 565 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AL049539.1-201ENST00000611964 459 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 VN1R74P-201ENST00000613259 503 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AC009464.1-201ENST00000615731 469 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 AC111188.2-201ENST00000529697 1387 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PTPN9P43378 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC135352.1-201ENST00000506173 1418 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 OR56B2P-201ENST00000317102 954 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 MIR525-201ENST00000384978 85 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 RN7SKP199-201ENST00000410325 305 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 AC012519.1-201ENST00000424588 610 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 CASP3P1-201ENST00000446037 609 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 MTCO2P6-201ENST00000463134 685 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AL161747.1-201ENST00000480068 358 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC069528.1-202ENST00000482888 637 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 MTCO3P35-201ENST00000485582 781 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.87□□□□□ -1.63
PTPN9P43378 OR7H2P-201ENST00000513483 306 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 VN1R84P-201ENST00000593697 235 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AL353600.1-201ENST00000608148 251 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC097505.1-201ENST00000610199 565 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC009159.2-201ENST00000617603 606 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 U6.48-201ENST00000618523 106 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 AC006386.1-201ENST00000619436 415 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 Z99129.2-201ENST00000619967 314 ntBASIC4.87□□□□□ -1.63
PTPN9P43378 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTPN9P43378 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.87□□□□□ -1.63
PTPN9P43378 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.87□□□□□ -1.63
PTPN9P43378 MAPK10-286ENST00000641208 8747 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 RNF6P1-201ENST00000444889 1784 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 AC046144.1-201ENST00000478559 1853 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN9P43378 RNU6-317P-201ENST00000384031 107 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 MIR921-201ENST00000401133 56 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AL133270.1-201ENST00000402635 279 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN9P43378 ATG4AP1-201ENST00000416893 538 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 Z75741.2-201ENST00000417272 1167 ntBASIC4.86□□□□□ -1.63
PTPN9P43378 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN9P43378 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN9P43378 GTF2IP2-201ENST00000424290 697 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms