Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CDY13P-201ENST00000445813 1015 ntBASIC3.92□□□□□ -1.78
RFC3P40938 CDY23P-201ENST00000451661 1014 ntBASIC3.92□□□□□ -1.78
RFC3P40938 ATP5G1P3-201ENST00000463301 410 ntBASIC3.92□□□□□ -1.78
RFC3P40938 SYT14P1-201ENST00000481459 721 ntBASIC3.92□□□□□ -1.78
RFC3P40938 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
RFC3P40938 AC005912.1-201ENST00000495392 255 ntBASIC3.92□□□□□ -1.78
RFC3P40938 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.92□□□□□ -1.78
RFC3P40938 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.92□□□□□ -1.78
RFC3P40938 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.92□□□□□ -1.78
RFC3P40938 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.92□□□□□ -1.78
RFC3P40938 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.92□□□□□ -1.78
RFC3P40938 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 VN1R85P-201ENST00000601587 426 ntBASIC3.92□□□□□ -1.78
RFC3P40938 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.92□□□□□ -1.78
RFC3P40938 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 AL161637.1-201ENST00000622380 412 ntBASIC3.92□□□□□ -1.78
RFC3P40938 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.92□□□□□ -1.78
RFC3P40938 AC119674.1-212ENST00000641155 993 ntBASIC3.92□□□□□ -1.78
RFC3P40938 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.92□□□□□ -1.78
RFC3P40938 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFC3P40938 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RFC3P40938 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFC3P40938 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.91□□□□□ -1.78
RFC3P40938 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFC3P40938 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFC3P40938 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFC3P40938 SPRR2C-201ENST00000290702 219 ntBASIC3.91□□□□□ -1.78
RFC3P40938 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
RFC3P40938 RNU4-23P-201ENST00000362839 140 ntBASIC3.91□□□□□ -1.78
RFC3P40938 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFC3P40938 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFC3P40938 RNU1-13P-201ENST00000384499 162 ntBASIC3.91□□□□□ -1.78
RFC3P40938 SNORA57.1-201ENST00000391227 145 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AL607077.1-201ENST00000401718 499 ntBASIC3.91□□□□□ -1.78
RFC3P40938 RN7SKP235-201ENST00000410662 305 ntBASIC3.91□□□□□ -1.78
RFC3P40938 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
RFC3P40938 MTND2P11-201ENST00000423638 648 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 CEACAMP1-201ENST00000434624 1035 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 VN1R32P-201ENST00000452234 905 ntBASIC3.91□□□□□ -1.78
RFC3P40938 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AC010374.1-201ENST00000503762 1237 ntBASIC3.91□□□□□ -1.78
RFC3P40938 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AL592156.1-201ENST00000508758 304 ntBASIC3.91□□□□□ -1.78
RFC3P40938 MIR2116-201ENST00000517221 80 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
RFC3P40938 AC107016.1-201ENST00000550463 337 ntBASIC3.91□□□□□ -1.78
RFC3P40938 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 AC092868.3-201ENST00000560515 784 ntBASIC3.91□□□□□ -1.78
RFC3P40938 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AC027455.1-201ENST00000574104 594 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.91□□□□□ -1.78
RFC3P40938 AL161729.3-201ENST00000603533 673 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC007390.2-201ENST00000606229 3803 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.91□□□□□ -1.78
RFC3P40938 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.91□□□□□ -1.78
RFC3P40938 AC024941.1-201ENST00000612250 334 ntBASIC3.91□□□□□ -1.78
RFC3P40938 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
RFC3P40938 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.91□□□□□ -1.78
RFC3P40938 AC007546.1-201ENST00000619452 559 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC114546.3-201ENST00000623582 1734 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC090506.2-201ENST00000624521 419 ntBASIC3.91□□□□□ -1.78
RFC3P40938 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFC3P40938 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RFC3P40938 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.91□□□□□ -1.78
RFC3P40938 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFC3P40938 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
RFC3P40938 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RFC3P40938 MIR372-201ENST00000362225 67 ntBASIC3.9□□□□□ -1.79
RFC3P40938 RNU1-14P-201ENST00000362759 152 ntBASIC3.9□□□□□ -1.79
RFC3P40938 SNORA37-201ENST00000384504 129 ntBASIC3.9□□□□□ -1.79
RFC3P40938 ZNF603P-201ENST00000405613 487 ntBASIC3.9□□□□□ -1.79
RFC3P40938 RNU6-564P-201ENST00000410983 104 ntBASIC3.9□□□□□ -1.79
RFC3P40938 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC062016.2-201ENST00000420950 676 ntBASIC3.9□□□□□ -1.79
RFC3P40938 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.9□□□□□ -1.79
RFC3P40938 AL157831.1-201ENST00000426134 473 ntBASIC3.9□□□□□ -1.79
RFC3P40938 VDAC1P6-201ENST00000430062 855 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC007563.3-201ENST00000433233 371 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms