Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RPL23AP97-201ENST00000568955 471 ntBASIC5.29□□□□□ -1.56
TM4SF1P30408 AL161756.2-201ENST00000604597 246 ntBASIC5.29□□□□□ -1.56
TM4SF1P30408 AC018618.2-201ENST00000604770 446 ntBASIC5.29□□□□□ -1.56
TM4SF1P30408 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.29□□□□□ -1.56
TM4SF1P30408 AL356121.2-201ENST00000624715 780 ntBASIC5.29□□□□□ -1.56
TM4SF1P30408 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.29□□□□□ -1.56
TM4SF1P30408 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.29□□□□□ -1.56
TM4SF1P30408 AC010300.1-201ENST00000600671 5134 ntBASIC5.29□□□□□ -1.56
TM4SF1P30408 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TM4SF1P30408 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TM4SF1P30408 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TM4SF1P30408 USP9YP4-201ENST00000424401 1745 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 AL592494.2-201ENST00000425455 1548 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF1P30408 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 AC006042.3-201ENST00000454684 1469 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TM4SF1P30408 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
TM4SF1P30408 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 RNA5SP187-201ENST00000384400 119 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF1P30408 AL606495.1-201ENST00000422100 813 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 MTCO1P54-201ENST00000430139 712 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 UBE2V1P6-201ENST00000430840 422 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 CEACAMP1-201ENST00000434624 1035 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 RNFT1P2-201ENST00000443064 757 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 NOTCH2P1-201ENST00000443481 624 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC097499.1-201ENST00000444277 208 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF1P30408 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 ATP5G1P3-201ENST00000463301 410 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC104687.1-201ENST00000485829 412 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.28□□□□□ -1.56
TM4SF1P30408 DSTNP2-201ENST00000504533 515 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF1P30408 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 AL352979.3-201ENST00000553515 247 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.28□□□□□ -1.56
TM4SF1P30408 HMGB2P1-201ENST00000591146 634 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC012468.1-201ENST00000604888 430 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC008966.2-201ENST00000606157 453 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 AL354798.1-201ENST00000622505 329 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 MIR6500-201ENST00000622700 86 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 AC020978.9-201ENST00000624380 1141 ntBASIC5.28□□□□□ -1.56
TM4SF1P30408 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
TM4SF1P30408 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TM4SF1P30408 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TM4SF1P30408 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TM4SF1P30408 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TM4SF1P30408 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TM4SF1P30408 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF1P30408 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF1P30408 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF1P30408 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.27□□□□□ -1.57
TM4SF1P30408 AC069540.1-201ENST00000446320 988 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 AC243772.1-201ENST00000451620 410 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 AC069304.1-201ENST00000491593 704 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 HPRT1P2-201ENST00000505250 544 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 PAICSP4-201ENST00000517543 1253 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 MIR548Y-201ENST00000582739 110 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC017100.2-201ENST00000584628 355 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC010487.1-201ENST00000594408 1172 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC090525.3-201ENST00000605601 189 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 AC007546.2-201ENST00000623996 360 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 DDX18P4-201ENST00000511690 1966 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.27□□□□□ -1.57
TM4SF1P30408 AL022393.1-201ENST00000625142 1677 ntBASIC5.27□□□□□ -1.57
TM4SF1P30408 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TM4SF1P30408 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.27□□□□□ -1.57
TM4SF1P30408 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.27□□□□□ -1.57
TM4SF1P30408 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.26□□□□□ -1.57
TM4SF1P30408 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms