Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD40P25942 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 MIR375-201ENST00000362103 64 ntBASIC5.11□□□□□ -1.59
CD40P25942 RN7SKP69-201ENST00000365390 305 ntBASIC5.11□□□□□ -1.59
CD40P25942 RN7SKP292-201ENST00000365522 317 ntBASIC5.11□□□□□ -1.59
CD40P25942 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 RPS3AP36-201ENST00000398190 775 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 AL031679.1-201ENST00000400616 525 ntBASIC5.11□□□□□ -1.59
CD40P25942 RNA5SP178-201ENST00000410380 128 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.11□□□□□ -1.59
CD40P25942 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.11□□□□□ -1.59
CD40P25942 AC113412.1-201ENST00000425840 504 ntBASIC5.11□□□□□ -1.59
CD40P25942 COX6CP15-201ENST00000426313 211 ntBASIC5.11□□□□□ -1.59
CD40P25942 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 AL596276.1-201ENST00000434465 418 ntBASIC5.11□□□□□ -1.59
CD40P25942 AL731534.1-201ENST00000434711 269 ntBASIC5.11□□□□□ -1.59
CD40P25942 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AL161636.2-201ENST00000445179 927 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC002381.1-201ENST00000447049 280 ntBASIC5.11□□□□□ -1.59
CD40P25942 AL162739.1-201ENST00000450606 307 ntBASIC5.11□□□□□ -1.59
CD40P25942 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 ACTR3P3-201ENST00000480448 893 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 RFPL4AP5-201ENST00000514977 504 ntBASIC5.11□□□□□ -1.59
CD40P25942 RNU6-314P-201ENST00000516574 104 ntBASIC5.11□□□□□ -1.59
CD40P25942 RNU6-1178P-201ENST00000516674 107 ntBASIC5.11□□□□□ -1.59
CD40P25942 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 COX6CP8-201ENST00000522620 226 ntBASIC5.11□□□□□ -1.59
CD40P25942 HSPA8P13-201ENST00000523715 472 ntBASIC5.11□□□□□ -1.59
CD40P25942 HMGN2P36-201ENST00000529541 409 ntBASIC5.11□□□□□ -1.59
CD40P25942 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.11□□□□□ -1.59
CD40P25942 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.11□□□□□ -1.59
CD40P25942 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.11□□□□□ -1.59
CD40P25942 AL606834.2-201ENST00000602954 668 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC233280.2-201ENST00000603917 1070 ntBASIC5.11□□□□□ -1.59
CD40P25942 AL159169.3-201ENST00000608871 561 ntBASIC5.11□□□□□ -1.59
CD40P25942 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 AL352984.2-201ENST00000611153 546 ntBASIC5.11□□□□□ -1.59
CD40P25942 AC022306.2-201ENST00000617563 647 ntBASIC5.11□□□□□ -1.59
CD40P25942 AP005431.1-201ENST00000618479 319 ntBASIC5.11□□□□□ -1.59
CD40P25942 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 MIR4302-201ENST00000638058 60 ntBASIC5.11□□□□□ -1.59
CD40P25942 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD40P25942 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD40P25942 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 AC004158.1-201ENST00000564508 4319 ntBASIC5.11□□□□□ -1.59
CD40P25942 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD40P25942 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.11□□□□□ -1.59
CD40P25942 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.11□□□□□ -1.59
CD40P25942 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD40P25942 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CD40P25942 RNA5SP500-201ENST00000364486 119 ntBASIC5.1□□□□□ -1.59
CD40P25942 Y_RNA.248-201ENST00000364501 109 ntBASIC5.1□□□□□ -1.59
CD40P25942 RNU6-1283P-201ENST00000365314 105 ntBASIC5.1□□□□□ -1.59
CD40P25942 RN7SKP81-201ENST00000365603 331 ntBASIC5.1□□□□□ -1.59
CD40P25942 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CD40P25942 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CD40P25942 SNORA70H-201ENST00000383910 135 ntBASIC5.1□□□□□ -1.59
CD40P25942 SNORA70J-201ENST00000384182 135 ntBASIC5.1□□□□□ -1.59
CD40P25942 RNU6-1226P-201ENST00000384317 107 ntBASIC5.1□□□□□ -1.59
CD40P25942 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.1□□□□□ -1.59
CD40P25942 AC073136.2-201ENST00000417282 849 ntBASIC5.1□□□□□ -1.59
CD40P25942 DPPA2P2-201ENST00000418220 897 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms