Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 MIR6820-201ENST00000611508 62 ntBASIC4.5□□□□□ -1.69
MSH3P20585 MIR4509-1-201ENST00000618224 94 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AC009704.2-201ENST00000618739 483 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AP005019.3-201ENST00000620418 560 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AP000770.2-201ENST00000623694 100 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AC068787.1-201ENST00000623908 691 ntBASIC4.5□□□□□ -1.69
MSH3P20585 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH3P20585 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH3P20585 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH3P20585 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
MSH3P20585 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSH3P20585 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH3P20585 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
MSH3P20585 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH3P20585 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH3P20585 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH3P20585 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
MSH3P20585 RNU6-244P-201ENST00000391028 104 ntBASIC4.49□□□□□ -1.69
MSH3P20585 RPS3AP25-201ENST00000411660 793 ntBASIC4.49□□□□□ -1.69
MSH3P20585 PDSS1P1-201ENST00000422953 1114 ntBASIC4.49□□□□□ -1.69
MSH3P20585 RPL21P91-201ENST00000429231 479 ntBASIC4.49□□□□□ -1.69
MSH3P20585 RPL23AP25-201ENST00000430973 463 ntBASIC4.49□□□□□ -1.69
MSH3P20585 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 RN7SL738P-201ENST00000470264 297 ntBASIC4.49□□□□□ -1.69
MSH3P20585 OR52A4P-201ENST00000472867 958 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 AC111000.3-201ENST00000508057 576 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 PDCD5P1-201ENST00000543528 309 ntBASIC4.49□□□□□ -1.69
MSH3P20585 CR383656.6-201ENST00000550518 394 ntBASIC4.49□□□□□ -1.69
MSH3P20585 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.49□□□□□ -1.69
MSH3P20585 AP005119.2-201ENST00000579735 1105 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH3P20585 AC093765.1-201ENST00000603758 881 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC079610.2-201ENST00000604818 690 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC100847.1-201ENST00000611316 481 ntBASIC4.49□□□□□ -1.69
MSH3P20585 AC145207.9-201ENST00000623802 325 ntBASIC4.49□□□□□ -1.69
MSH3P20585 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH3P20585 AC083865.1-201ENST00000636634 831 ntBASIC4.49□□□□□ -1.69
MSH3P20585 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH3P20585 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH3P20585 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
MSH3P20585 AL592148.3-201ENST00000608771 2646 ntBASIC4.48□□□□□ -1.69
MSH3P20585 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MSH3P20585 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MSH3P20585 GTF2IP2-201ENST00000424290 697 ntBASIC4.48□□□□□ -1.69
MSH3P20585 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MSH3P20585 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 AL096803.2-201ENST00000450032 677 ntBASIC4.48□□□□□ -1.69
MSH3P20585 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.48□□□□□ -1.69
MSH3P20585 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
MSH3P20585 UBA52P3-201ENST00000491303 382 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AK3P4-201ENST00000504283 583 ntBASIC4.48□□□□□ -1.69
MSH3P20585 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.48□□□□□ -1.69
MSH3P20585 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 SNORA19.3-201ENST00000516165 130 ntBASIC4.48□□□□□ -1.69
MSH3P20585 RNA5SP228-201ENST00000516232 133 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AP001207.2-201ENST00000519490 539 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AC090151.1-201ENST00000520784 730 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MSH3P20585 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.48□□□□□ -1.69
MSH3P20585 AL109741.3-201ENST00000561748 592 ntBASIC4.48□□□□□ -1.69
MSH3P20585 MIR4330-201ENST00000579077 105 ntBASIC4.48□□□□□ -1.69
MSH3P20585 SLC25A36P1-201ENST00000590111 465 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.48□□□□□ -1.69
MSH3P20585 MIR7703-201ENST00000620784 77 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AL078595.3-201ENST00000623815 1166 ntBASIC4.48□□□□□ -1.69
MSH3P20585 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.48□□□□□ -1.69
MSH3P20585 AC132825.7-201ENST00000638744 335 ntBASIC4.48□□□□□ -1.69
MSH3P20585 AC017007.4-201ENST00000503353 1352 ntBASIC4.48□□□□□ -1.69
MSH3P20585 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.48□□□□□ -1.69
MSH3P20585 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
MSH3P20585 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MSH3P20585 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MSH3P20585 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms