Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 MTCO1P18-201ENST00000455518 1419 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 MIR16-2-201ENST00000362117 81 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 RNA5SP447-201ENST00000363749 119 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 RNU6-1279P-201ENST00000383917 103 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 U3.22-201ENST00000391120 215 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 RN7SKP167-201ENST00000411047 285 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 SNRPFP1-201ENST00000414761 252 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFRAP16234 UBE2D3P3-201ENST00000426992 425 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
PDGFRAP16234 ETF1P3-201ENST00000430422 1160 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFRAP16234 RPS27AP15-201ENST00000447672 466 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC239809.1-201ENST00000450470 217 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.66□□□□□ -1.66
PDGFRAP16234 EIF2S2P5-201ENST00000457635 968 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 RN7SL41P-201ENST00000476144 297 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 SETP6-201ENST00000479329 568 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 RN7SL817P-201ENST00000480777 288 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC083829.1-201ENST00000503756 657 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 OR51K1P-201ENST00000510214 950 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.66□□□□□ -1.66
PDGFRAP16234 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFRAP16234 IGKV2-36-201ENST00000519999 223 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFRAP16234 AC113192.3-201ENST00000529152 742 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 MIR4716-201ENST00000579628 84 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 SLC25A36P1-201ENST00000590111 465 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AL160290.3-201ENST00000604869 165 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AL158211.2-201ENST00000607282 395 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AL353726.1-201ENST00000614041 1000 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 AC009318.3-201ENST00000616916 503 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PDGFRAP16234 AL353743.4-201ENST00000422653 1547 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDGFRAP16234 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFRAP16234 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFRAP16234 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFRAP16234 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFRAP16234 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
PDGFRAP16234 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
PDGFRAP16234 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 RPS20P14-201ENST00000412545 360 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC009237.10-201ENST00000414112 510 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC073310.1-201ENST00000423226 1033 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC016712.1-201ENST00000431088 378 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC006511.1-201ENST00000470614 315 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 CYCSP20-201ENST00000473154 315 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 MTCO2P9-201ENST00000503214 694 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 IGLVIV-65-201ENST00000517313 360 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 DEFB109D-201ENST00000529497 240 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC093510.2-201ENST00000562820 896 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC106785.3-201ENST00000564064 847 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 MIR4277-201ENST00000578298 84 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC115286.1-201ENST00000604298 434 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 OR6R2P-201ENST00000609216 300 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC006946.3-201ENST00000609791 756 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AL121873.1-201ENST00000616013 524 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 MIR6891-201ENST00000618788 93 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC067852.7-201ENST00000623270 535 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC007546.2-201ENST00000623996 360 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC067931.1-201ENST00000624190 671 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.65□□□□□ -1.67
PDGFRAP16234 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PDGFRAP16234 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDGFRAP16234 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AP001273.1-201ENST00000624493 3152 ntBASIC4.65□□□□□ -1.67
PDGFRAP16234 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PDGFRAP16234 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms