Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 NIPA2P1-201ENST00000426223 976 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 ATP5LP2-201ENST00000440646 311 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC239367.2-201ENST00000447309 705 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 NPM1P39-201ENST00000449818 867 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AL672138.1-201ENST00000450604 1015 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.59□□□□□ -1.51
COL6A2P12110 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.59□□□□□ -1.51
COL6A2P12110 SNRPFP4-201ENST00000456366 242 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 RN7SL72P-201ENST00000460697 269 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AP000797.1-201ENST00000478870 387 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 OR4G11P-201ENST00000492842 939 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC023424.2-201ENST00000493479 777 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.59□□□□□ -1.51
COL6A2P12110 RPSAP51-201ENST00000497462 645 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.59□□□□□ -1.51
COL6A2P12110 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 MIR4675-201ENST00000577898 77 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 MIR4311-201ENST00000580794 100 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 H3F3BP2-201ENST00000583907 357 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 MIR548AB-201ENST00000584917 84 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 VN1R84P-201ENST00000593697 235 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AL591926.1-201ENST00000620542 217 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC073592.6-201ENST00000624271 415 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL6A2P12110 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.59□□□□□ -1.52
COL6A2P12110 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL6A2P12110 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL6A2P12110 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.59□□□□□ -1.52
COL6A2P12110 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
COL6A2P12110 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.59□□□□□ -1.52
COL6A2P12110 AL606537.1-201ENST00000607258 2011 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL6A2P12110 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC022031.1-201ENST00000585985 2593 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 AL159987.1-201ENST00000347911 293 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 RNU6-115P-201ENST00000364310 107 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 RN7SKP269-201ENST00000365545 319 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 RNU6-1122P-201ENST00000384449 107 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 AL450338.1-201ENST00000407987 512 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL136133.1-201ENST00000413694 376 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL354890.1-201ENST00000413730 346 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 MRPL53P1-201ENST00000414323 319 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC079809.1-201ENST00000415468 276 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 TMBIM7P-201ENST00000418074 855 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC009237.2-201ENST00000421358 284 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL953862.1-201ENST00000423016 168 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 USP9YP18-201ENST00000425912 695 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL6A2P12110 AC104843.2-201ENST00000427666 297 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 HSPD1P12-201ENST00000429127 1069 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 MTCO3P21-201ENST00000430791 643 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC126120.1-201ENST00000431082 470 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 AC073465.2-201ENST00000440938 498 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AL035551.1-201ENST00000446931 348 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 EEF1E1P1-201ENST00000446998 430 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 NANOGNBP1-201ENST00000448444 480 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 PAXBP1P1-201ENST00000449315 447 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.58□□□□□ -1.52
COL6A2P12110 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.58□□□□□ -1.52
COL6A2P12110 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 RN7SKP238-201ENST00000516483 249 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.58□□□□□ -1.52
COL6A2P12110 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 DEFB131D-201ENST00000526803 184 ntBASIC5.58□□□□□ -1.52
COL6A2P12110 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.58□□□□□ -1.52
COL6A2P12110 NANOGNBP2-201ENST00000544753 553 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms