Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC243654.2-201ENST00000612843 443 ntBASIC4.91□□□□□ -1.62
RB1P06400 AC007275.1-201ENST00000621243 671 ntBASIC4.91□□□□□ -1.62
RB1P06400 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 AC090017.1-201ENST00000548612 1779 ntBASIC4.91□□□□□ -1.62
RB1P06400 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RB1P06400 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.9□□□□□ -1.62
RB1P06400 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RB1P06400 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RB1P06400 SEC63P2-201ENST00000503863 1939 ntBASIC4.9□□□□□ -1.62
RB1P06400 ASNSP1-201ENST00000518311 1939 ntBASIC4.9□□□□□ -1.62
RB1P06400 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.9□□□□□ -1.62
RB1P06400 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 ENSAP3-201ENST00000312710 333 ntBASIC4.9□□□□□ -1.63
RB1P06400 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RB1P06400 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 RNU6-1257P-201ENST00000384625 110 ntBASIC4.9□□□□□ -1.63
RB1P06400 EIF4A1P3-201ENST00000411521 244 ntBASIC4.9□□□□□ -1.63
RB1P06400 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 RPL34P6-201ENST00000432390 345 ntBASIC4.9□□□□□ -1.63
RB1P06400 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 HSFY6P-201ENST00000445573 403 ntBASIC4.9□□□□□ -1.63
RB1P06400 PHBP16-201ENST00000446318 950 ntBASIC4.9□□□□□ -1.63
RB1P06400 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 GTF2IP12-201ENST00000456547 356 ntBASIC4.9□□□□□ -1.63
RB1P06400 ATP5G1P3-201ENST00000463301 410 ntBASIC4.9□□□□□ -1.63
RB1P06400 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.9□□□□□ -1.63
RB1P06400 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 PARP4P3-201ENST00000510265 317 ntBASIC4.9□□□□□ -1.63
RB1P06400 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 ATP5F1P7-201ENST00000567330 760 ntBASIC4.9□□□□□ -1.63
RB1P06400 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.9□□□□□ -1.63
RB1P06400 AC125494.3-201ENST00000602759 455 ntBASIC4.9□□□□□ -1.63
RB1P06400 MIR92B-201ENST00000607575 96 ntBASIC4.9□□□□□ -1.63
RB1P06400 AC096586.1-201ENST00000610267 561 ntBASIC4.9□□□□□ -1.63
RB1P06400 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.9□□□□□ -1.63
RB1P06400 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 AC022306.3-201ENST00000619930 550 ntBASIC4.9□□□□□ -1.63
RB1P06400 AC138907.10-201ENST00000623708 983 ntBASIC4.9□□□□□ -1.63
RB1P06400 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RB1P06400 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.9□□□□□ -1.63
RB1P06400 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 AC083899.2-201ENST00000423285 1376 ntBASIC4.9□□□□□ -1.63
RB1P06400 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.9□□□□□ -1.63
RB1P06400 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.9□□□□□ -1.63
RB1P06400 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RB1P06400 AL136164.3-201ENST00000624429 3978 ntBASIC4.89□□□□□ -1.63
RB1P06400 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RB1P06400 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 HSPA8P19-201ENST00000505359 1517 ntBASIC4.89□□□□□ -1.63
RB1P06400 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.89□□□□□ -1.63
RB1P06400 MIR659-201ENST00000384963 97 ntBASIC4.89□□□□□ -1.63
RB1P06400 MIR620-201ENST00000385232 95 ntBASIC4.89□□□□□ -1.63
RB1P06400 RN7SKP16-201ENST00000410180 299 ntBASIC4.89□□□□□ -1.63
RB1P06400 AL354692.1-201ENST00000423044 315 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.89□□□□□ -1.63
RB1P06400 PPIAP13-201ENST00000434706 478 ntBASIC4.89□□□□□ -1.63
RB1P06400 GXYLT1P1-201ENST00000446657 490 ntBASIC4.89□□□□□ -1.63
RB1P06400 MTND2P8-201ENST00000450555 1025 ntBASIC4.89□□□□□ -1.63
RB1P06400 RPS7P7-201ENST00000463499 571 ntBASIC4.89□□□□□ -1.63
RB1P06400 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 AC098799.3-201ENST00000506095 438 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC020593.1-201ENST00000507399 299 ntBASIC4.89□□□□□ -1.63
RB1P06400 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RB1P06400 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.89□□□□□ -1.63
RB1P06400 AC105031.1-201ENST00000518550 476 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.89□□□□□ -1.63
RB1P06400 AC083923.1-201ENST00000523708 376 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC087894.1-201ENST00000538359 518 ntBASIC4.89□□□□□ -1.63
RB1P06400 PDCD5P1-201ENST00000543528 309 ntBASIC4.89□□□□□ -1.63
RB1P06400 OR8R1P-201ENST00000543943 764 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC011611.5-201ENST00000552477 578 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.89□□□□□ -1.63
RB1P06400 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.89□□□□□ -1.63
RB1P06400 VN1R84P-201ENST00000593697 235 ntBASIC4.89□□□□□ -1.63
RB1P06400 AP001160.4-201ENST00000596971 382 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC024933.1-201ENST00000608472 348 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC131238.1-201ENST00000617135 328 ntBASIC4.89□□□□□ -1.63
RB1P06400 AL669942.2-201ENST00000620352 697 ntBASIC4.89□□□□□ -1.63
RB1P06400 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC024595.1-201ENST00000623088 387 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms