Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ELOCP30-201ENST00000447108 299 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL3A1P02461 MTND1P27-201ENST00000451117 902 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.58□□□□□ -1.52
COL3A1P02461 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.58□□□□□ -1.52
COL3A1P02461 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.58□□□□□ -1.52
COL3A1P02461 RPS29P19-201ENST00000479709 171 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.58□□□□□ -1.52
COL3A1P02461 KCTD9P2-201ENST00000512203 1013 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.58□□□□□ -1.52
COL3A1P02461 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.58□□□□□ -1.52
COL3A1P02461 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.58□□□□□ -1.52
COL3A1P02461 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL3A1P02461 AC084824.1-201ENST00000550917 1005 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.58□□□□□ -1.52
COL3A1P02461 TVP23BP1-201ENST00000557500 617 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 AL365400.2-201ENST00000605604 902 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 AL031666.3-201ENST00000609320 1006 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.58□□□□□ -1.52
COL3A1P02461 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.58□□□□□ -1.52
COL3A1P02461 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.58□□□□□ -1.52
COL3A1P02461 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.57□□□□□ -1.52
COL3A1P02461 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
COL3A1P02461 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 NR1H5P-201ENST00000452683 1377 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
COL3A1P02461 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 SNORA48.7-201ENST00000391302 135 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AMZ2P2-201ENST00000406819 1057 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 CEACAMP8-201ENST00000413902 580 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.57□□□□□ -1.52
COL3A1P02461 MTCO3P4-201ENST00000419236 787 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 MTND2P18-201ENST00000419962 1030 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AL389915.1-201ENST00000422463 466 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 EIF1P3-201ENST00000423841 334 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AL512637.2-201ENST00000431287 1256 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 MTND2P5-201ENST00000432656 1006 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 CDC27P1-201ENST00000445384 715 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.57□□□□□ -1.52
COL3A1P02461 AC044797.1-201ENST00000445744 679 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.57□□□□□ -1.52
COL3A1P02461 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.57□□□□□ -1.52
COL3A1P02461 AC005008.1-201ENST00000456151 612 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 RPL36AP13-201ENST00000457490 317 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.57□□□□□ -1.52
COL3A1P02461 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.57□□□□□ -1.52
COL3A1P02461 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 NAMPTP2-201ENST00000505629 1115 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC121161.1-201ENST00000510606 652 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 RNU6-760P-201ENST00000516078 97 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.57□□□□□ -1.52
COL3A1P02461 PHBP17-201ENST00000528576 541 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.57□□□□□ -1.52
COL3A1P02461 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.57□□□□□ -1.52
COL3A1P02461 MIR5684-201ENST00000585074 65 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.57□□□□□ -1.52
COL3A1P02461 PCNAP1-202ENST00000595299 752 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AC069431.2-201ENST00000604149 1099 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.57□□□□□ -1.52
COL3A1P02461 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.57□□□□□ -1.52
COL3A1P02461 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL3A1P02461 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 EIF3EP2-201ENST00000423042 1814 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL3A1P02461 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL3A1P02461 ASNSP1-204ENST00000641977 1664 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL3A1P02461 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.56□□□□□ -1.52
COL3A1P02461 SNORA37-201ENST00000384504 129 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 MIR134-201ENST00000385258 73 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 AL445528.1-201ENST00000426330 420 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 MTND1P20-201ENST00000430341 950 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 Z85994.2-201ENST00000434327 452 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 AC006011.1-201ENST00000442758 349 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 MTND1P1-201ENST00000445453 368 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 TPT1P3-201ENST00000492841 512 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL3A1P02461 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.56□□□□□ -1.52
COL3A1P02461 SNORA31.9-201ENST00000516429 84 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 AC090819.1-201ENST00000523800 1111 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.56□□□□□ -1.52
COL3A1P02461 DYNLL1P4-201ENST00000549314 266 ntBASIC5.56□□□□□ -1.52
COL3A1P02461 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.56□□□□□ -1.52
COL3A1P02461 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms