Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.08□□□□□ -1.76
SHOX2O60902 MIR3934-201ENST00000579806 107 ntBASIC4.08□□□□□ -1.76
SHOX2O60902 AC068831.8-201ENST00000620171 435 ntBASIC4.08□□□□□ -1.76
SHOX2O60902 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.08□□□□□ -1.76
SHOX2O60902 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHOX2O60902 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHOX2O60902 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHOX2O60902 AL451142.2-201ENST00000429076 2090 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHOX2O60902 OR10AB1P-202ENST00000641219 1686 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SHOX2O60902 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHOX2O60902 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHOX2O60902 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHOX2O60902 RNVU1-6-201ENST00000364688 164 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 RNU4-7P-201ENST00000364758 141 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC068538.1-201ENST00000376856 336 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AL391417.1-201ENST00000404100 426 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.07□□□□□ -1.76
SHOX2O60902 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.07□□□□□ -1.76
SHOX2O60902 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHOX2O60902 AC099336.2-201ENST00000422457 254 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
SHOX2O60902 RPS26P47-201ENST00000427219 348 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC006946.1-201ENST00000429106 328 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.07□□□□□ -1.76
SHOX2O60902 AL353597.2-202ENST00000434901 373 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 BTG3P1-201ENST00000435859 716 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.07□□□□□ -1.76
SHOX2O60902 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.07□□□□□ -1.76
SHOX2O60902 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.07□□□□□ -1.76
SHOX2O60902 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 RN7SKP83-201ENST00000516512 178 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 RNU4-18P-201ENST00000516751 149 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.07□□□□□ -1.76
SHOX2O60902 AP001781.1-201ENST00000530977 207 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC007424.1-203ENST00000554613 687 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 UBE2FP2-201ENST00000566646 462 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.07□□□□□ -1.76
SHOX2O60902 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.07□□□□□ -1.76
SHOX2O60902 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
SHOX2O60902 AC114878.2-201ENST00000604863 1251 ntBASIC4.07□□□□□ -1.76
SHOX2O60902 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.07□□□□□ -1.76
SHOX2O60902 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHOX2O60902 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.07□□□□□ -1.76
SHOX2O60902 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHOX2O60902 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHOX2O60902 AC006504.1-201ENST00000562493 3666 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.06□□□□□ -1.76
SHOX2O60902 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SHOX2O60902 HLFP1-201ENST00000402375 499 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 RN7SKP285-201ENST00000410137 318 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC022022.1-201ENST00000430304 178 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.06□□□□□ -1.76
SHOX2O60902 AC245517.2-201ENST00000442890 346 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.06□□□□□ -1.76
SHOX2O60902 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.06□□□□□ -1.76
SHOX2O60902 EIF4A1P11-201ENST00000451239 222 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 CEACAMP6-201ENST00000452007 574 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 DNAJC19P1-201ENST00000455312 319 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.06□□□□□ -1.76
SHOX2O60902 snoU13.22-201ENST00000459428 104 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC034236.1-201ENST00000469891 373 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 AC010374.1-201ENST00000503762 1237 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 PCBP2P3-201ENST00000509726 843 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 ARL2BPP6-201ENST00000512757 439 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.06□□□□□ -1.76
SHOX2O60902 AC034105.4-201ENST00000568304 277 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.06□□□□□ -1.76
SHOX2O60902 RPL23AP87-202ENST00000573039 466 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.06□□□□□ -1.76
SHOX2O60902 MIR4284-201ENST00000578924 81 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC091042.1-201ENST00000579213 173 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.06□□□□□ -1.76
SHOX2O60902 BRDTP1-201ENST00000605735 677 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC090948.2-201ENST00000607363 564 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AL354950.1-201ENST00000614150 568 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC092628.2-201ENST00000622492 339 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 AC021106.3-201ENST00000623925 531 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SHOX2O60902 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.06□□□□□ -1.76
SHOX2O60902 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHOX2O60902 AL445437.1-201ENST00000623157 3087 ntBASIC4.06□□□□□ -1.76
SHOX2O60902 RIOK3P1-201ENST00000418778 1528 ntBASIC4.05□□□□□ -1.76
SHOX2O60902 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHOX2O60902 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHOX2O60902 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.05□□□□□ -1.76
SHOX2O60902 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms